RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 BARD1Q99728 777 aaKnown RBP10.11□□□□□ -0.79
LMX1A-201ENST00000294816 ZBED2Q9BTP6 218 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 MFSD1Q9H3U5 465 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 SP110Q9HB58 689 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 ZIM2Q9NZV7 527 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 ZMYM5Q9UJ78 669 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 IKZF3Q9UKT9 509 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 H3BRB1 525 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 J3KR12 359 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 SSX4O60224 188 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 CACNG3O60359 315 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 USP2O75604 605 aaPredicted RBP10.11□□□□□ -0.79
LMX1A-201ENST00000294816 CNPP09543 421 aaKnown RBP10.11□□□□□ -0.79
LMX1A-201ENST00000294816 GMPSP49915 693 aaPredicted RBP10.11□□□□□ -0.79
LMX1A-201ENST00000294816 RAD51Q06609 339 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 SLC10A7Q0GE19 358 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 CDC20Q12834 499 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 FOXD4Q12950 439 aaPredicted RBP10.11□□□□□ -0.79
LMX1A-201ENST00000294816 PWP1Q13610 501 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 GALNT3Q14435 633 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 SEMA3AQ14563 771 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 SLC14A2Q15849 920 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 TIGD7Q6NT04 549 aaPredicted RBP10.11□□□□□ -0.79
LMX1A-201ENST00000294816 GALNT13Q8IUC8 556 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 OR8H2Q8N162 312 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 METTL4Q8N3J2 472 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 ZMIZ2Q8NF64 920 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 OR52B6Q8NGF0 335 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 OR56A4Q8NGH8 313 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 ZFP14Q9HCL3 533 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 C14orf119Q9NWQ9 140 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 OPTCQ9UBM4 332 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 PSME4Q14997 1843 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 ISPDA4D126 451 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 NDST3O95803 873 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 MSH3P20585 1137 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 OR2B6P58173 313 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 DEFA1P59665 94 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 DEFA3P59666 94 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 RPL38P63173 70 aaKnown RBP10.1□□□□□ -0.79
LMX1A-201ENST00000294816 AP5B1Q2VPB7 878 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 SIRPB2Q5JXA9 342 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 PM20D1Q6GTS8 502 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 KDELC1Q6UW63 502 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 DLK2Q6UY11 383 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 EFL1Q7Z2Z2 1120 aaKnown RBP10.1□□□□□ -0.79
LMX1A-201ENST00000294816 CLIP3Q96DZ5 547 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 SLC25A51Q9H1U9 297 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 IKZF5Q9H5V7 419 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 GIMAP4Q9NUV9 329 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 DKK3Q9UBP4 350 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 N6AMT1Q9Y5N5 214 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 SNX8Q9Y5X2 465 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 A0A1W2PQ67 120 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 AGAP5A6NIR3 686 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 SAGE2PA6NJ88 616 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 HOXC11O43248 304 aaPredicted RBP10.1□□□□□ -0.79
LMX1A-201ENST00000294816 KERAO60938 352 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 GJB3O75712 270 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 CAPN1P07384 714 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 HSMCR30P0CW71 290 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 FCGRTP55899 365 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 CYP4F2P78329 520 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 PTGR1Q14914 329 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 MAPKAPK3Q16644 382 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF181Q2M3W8 571 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 FAM174BQ3ZCQ3 159 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 ZFP69Q49AA0 526 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 SOWAHCQ53LP3 525 aaPredicted RBP10.1□□□□□ -0.79
LMX1A-201ENST00000294816 MARC1Q5VT66 337 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 LAIR1Q6GTX8 287 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 ASCC1Q8N9N2 400 aaKnown RBP10.1□□□□□ -0.79
LMX1A-201ENST00000294816 ATG16L2Q8NAA4 619 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 PJA1Q8NG27 643 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 DPF3Q92784 378 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 CEP19Q96LK0 163 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 ZFP42Q96MM3 310 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 GPR21Q99679 349 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 NUAK2Q9H093 628 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 TFB2MQ9H5Q4 396 aaKnown RBP10.1□□□□□ -0.79
LMX1A-201ENST00000294816 RNF167Q9H6Y7 350 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 ACOT13Q9NPJ3 140 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 CATSPERZQ9NTU4 200 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF112Q9UJU3 913 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 SNX6Q9UNH7 406 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 ASB1Q9Y576 335 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 SSC5DA1L4H1 1573 aa10.1□□□□□ -0.79
LMX1A-201ENST00000294816 FFAR3O14843 346 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 GPR42O15529 346 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 CYP7B1O75881 506 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 MED26O95402 600 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 NTRK1P04629 796 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 CHRNB1P11230 501 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 WARSP23381 471 aaKnown RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 CD6P30203 668 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 SLC26A3P40879 764 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 CLK3P49761 638 aaKnown RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 ARHGDIAP52565 204 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 DAB2P98082 770 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 PON2Q15165 354 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms