RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 EFSO43281 561 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 RAD1O60671 282 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 STIP1P31948 543 aaKnown RBP9.54□□□□□ -0.88
CCDC58-201ENST00000291458 FOXN2P32314 431 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 ARL4DP49703 201 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 SMCPP49901 116 aaPredicted RBP9.54□□□□□ -0.88
CCDC58-201ENST00000291458 RAB15P59190 212 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 PRAMEP78395 509 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 SEMA5AQ13591 1074 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 SKIDA1Q1XH10 827 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 DNTTIP2Q5QJE6 756 aaKnown RBP9.54□□□□□ -0.88
CCDC58-201ENST00000291458 TSTD2Q5T7W7 516 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 METRNLQ641Q3 311 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 ARMC6Q6NXE6 501 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 INO80CQ6PI98 192 aaPredicted RBP9.54□□□□□ -0.88
CCDC58-201ENST00000291458 AFTPHQ6ULP2 937 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 XKR5Q6UX68 686 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 WASH2PQ6VEQ5 465 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 CERS6Q6ZMG9 384 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 ARHGAP22Q7Z5H3 698 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 RASGRP3Q8IV61 690 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 CACNA2D3Q8IZS8 1091 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 SLC35F6Q8N357 371 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 BMPERQ8N8U9 685 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 PPHLN1Q8NEY8 458 aaKnown RBP9.54□□□□□ -0.88
CCDC58-201ENST00000291458 OR13J1Q8NGT2 312 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 DTX3LQ8TDB6 740 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 ELMO1Q92556 727 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 HPS1Q92902 700 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 ZNF514Q96K75 400 aaPredicted RBP9.54□□□□□ -0.88
CCDC58-201ENST00000291458 PPM1MQ96MI6 270 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 OR6C1Q96RD1 312 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 FERD3LQ96RJ6 166 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 DDA1Q9BW61 102 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 AP1M1Q9BXS5 423 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 FRMD8P1Q9BZ68 369 aaPredicted RBP9.54□□□□□ -0.88
CCDC58-201ENST00000291458 ULBP3Q9BZM4 244 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 KLHL25Q9H0H3 589 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 EPB41L1Q9H4G0 881 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 XKR8Q9H6D3 395 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 UCK1Q9HA47 277 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 WASH6PQ9NQA3 447 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 TCAF1Q9Y4C2 921 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 CELSR3Q9NYQ7 3312 aa9.54□□□□□ -0.88
CCDC58-201ENST00000291458 DSPP15924 2871 aaKnown RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 UBA6A0AVT1 1052 aaPredicted RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 MROH6A6NGR9 719 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 ERI2A8K979 691 aaKnown RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 B4E171 279 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 IFRD1O00458 451 aaPredicted RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 POLR1CO15160 346 aaPredicted RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 ATXN7O15265 892 aaPredicted RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 OR1I1O60431 355 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 STK17BO94768 372 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 C9P02748 559 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 F7P08709 466 aaPredicted RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 EBLN1P0CF75 366 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 PRKAR1AP10644 381 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 LIFP15018 202 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 ZNF28P17035 718 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 POLR2CP19387 275 aaPredicted RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 MGAT1P26572 445 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 CD82P27701 267 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 PDHA2P29803 388 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 TSPAN7P41732 249 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 MC2RQ01718 297 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 PRKG2Q13237 762 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 SQSTM1Q13501 440 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 SEMA3AQ14563 771 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 CCNG2Q16589 344 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 GPR33Q49SQ1 333 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 CES3Q6UWW8 571 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 CEACAM20Q6UY09 585 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 OOSP2Q86WS3 158 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 RBM12BQ8IXT5 1001 aaKnown RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 PRELID2Q8N945 189 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 PHC3Q8NDX5 983 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 OR4E2Q8NGC2 313 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 LKAAEAR1Q8TD35 194 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 MAIP1Q8WWC4 291 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 EXTL1Q92935 676 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 ZDHHC12Q96GR4 267 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 MAP3K3Q99759 626 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 CCM2Q9BSQ5 444 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 KCNF1Q9H3M0 494 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 VPS37BQ9H9H4 285 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 CASS4Q9NQ75 786 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 SOHLH2Q9NX45 425 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 SYBUQ9NX95 663 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 SIDT1Q9NXL6 827 aaKnown RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 PDP2Q9P2J9 529 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 CIDEBQ9UHD4 219 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 SLC24A2Q9UI40 661 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 LNPEPQ9UIQ6 1025 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 ACSL6Q9UKU0 697 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 PLAGL1Q9UM63 463 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 TDRKHQ9Y2W6 561 aaKnown RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 DNMT3AQ9Y6K1 912 aaPredicted RBP9.53□□□□□ -0.88
CCDC58-201ENST00000291458 CHD6Q8TD26 2715 aa9.53□□□□□ -0.88
CCDC58-201ENST00000291458 IGLV3-16A0A075B6K0 115 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms