RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ALPK3Q96L96 1907 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 TCRBV5S2A0A599 114 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 GOLGA8CPA6NN73 597 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 H3BMM5 538 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 PIP5K1BO14986 540 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 FZD6O60353 706 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 ZNF821O75541 412 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 CLIC3O95833 236 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 LBPP18428 481 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 HLA-FP30511 346 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 PLEKHG6Q3KR16 790 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 MPPE1Q53F39 396 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 DGKKQ5KSL6 1271 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 BLOC1S3Q6QNY0 202 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 RAB44Q7Z6P3 723 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 OFCC1Q8IZS5 231 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 TTC30BQ8N4P2 665 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 LEMD2Q8NC56 503 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 TMEM125Q96AQ2 219 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 CCDC68Q9H2F9 335 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 ZNF639Q9UID6 485 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 ANAPC2Q9UJX6 822 aa18.03■□□□□ 0.48
PDLIM3-201ENST00000284767 CARNS1A5YM72 827 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 H0YAE9 185 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 INPP4BO15327 924 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 SUPT3HO75486 399 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 CDK14O94921 469 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 IDO1P14902 403 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 UGT1A1P22309 533 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 UGT1A4P22310 534 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 UGT1A3P35503 534 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 UGT1A5P35504 534 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 TMBIM6P55061 237 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 TYSND1Q2T9J0 566 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 SETMARQ53H47 684 aaPredicted RBP18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 ASTLQ6HA08 431 aaPredicted RBP18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 ANKRD26P1Q6NSI1 321 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 DCDC5Q6ZRR9 648 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 LINC00597Q9H2U6 94 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 ALG2Q9H553 416 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 GNPTGQ9UJJ9 305 aa18.02■□□□□ 0.48
PDLIM3-201ENST00000284767 TMEM221A6NGB7 291 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 GRXCR1A8MXD5 290 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 GRM6O15303 877 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 STX7O15400 261 aaKnown RBP18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 FOXD2O60548 495 aaPredicted RBP18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 VPS4BO75351 444 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 CES1P23141 567 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 ADARB1P78563 741 aaKnown RBP18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 GRB7Q14451 532 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 CBX2Q14781 532 aaPredicted RBP18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 RPS6KA2Q15349 733 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 TGFBIQ15582 683 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 AASDHQ4L235 1098 aaPredicted RBP18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 ZRANB3Q5FWF4 1079 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 AFTPHQ6ULP2 937 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 CPXM2Q8N436 756 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 OR13F1Q8NGS4 319 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 SLC30A3Q99726 388 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 AARSD1Q9BTE6 412 aaKnown RBP18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 MID1IP1Q9NPA3 183 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 SLC52A3Q9NQ40 469 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 COQ6Q9Y2Z9 468 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 IRAK3Q9Y616 596 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 SLC30A1Q9Y6M5 507 aa18.02■□□□□ 0.47
PDLIM3-201ENST00000284767 LINC01553A4QN01 128 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 ZBTB11O95625 1053 aaPredicted RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 RHOP08100 348 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 TFPTP0C1Z6 253 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 OCM2P0CE71 109 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 OCMP0CE72 109 aaPredicted RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 OGNP20774 298 aaKnown RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 CD247P20963 164 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 CA5AP35218 305 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 GSK3BP49841 420 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 CDH13P55290 713 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 GEN1Q17RS7 908 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 FBXO48Q5FWF7 155 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 RETSATQ6NUM9 610 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 C16orf87Q6PH81 154 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 CPNE9Q8IYJ1 553 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 PAF1Q8N7H5 531 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 PTGR2Q8N8N7 351 aaPredicted RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 PDPRQ8NCN5 879 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 OSCP1Q8WVF1 389 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 PIH1D2Q8WWB5 315 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 ING5Q8WYH8 240 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 ZSWIM3Q96MP5 696 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 IKZF3Q9UKT9 509 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 BLOC1S6Q9UL45 172 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 RIMKLBQ9ULI2 386 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 LDLRP01130 860 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 CD1DP15813 335 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 ZNF37AP17032 561 aaPredicted RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 JUNBP17275 347 aaPredicted RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 CCNA2P20248 432 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 MRPL19P49406 292 aaKnown RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 NFATC3Q12968 1075 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 ZNF773Q6PK81 442 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 PAQR3Q6TCH7 311 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms