RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 DUSP4Q13115 394 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 EOGTQ5NDL2 527 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 UBXN11Q5T124 520 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MBOAT1Q6ZNC8 495 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MRPL41Q8IXM3 137 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 KBTBD2Q8IY47 623 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 RNF148Q8N7C7 305 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ATAD1Q8NBU5 361 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 OR4K17Q8NGC6 315 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 DNAJB14Q8TBM8 379 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SEMA4DQ92854 862 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CLPTM1LQ96KA5 538 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 IFT27Q9BW83 186 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 BCO2Q9BYV7 579 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PTPRHQ9HD43 1115 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SSU72Q9NP77 194 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 RAB9BQ9NP90 201 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PFDN2Q9UHV9 154 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SLC27A5Q9Y2P5 690 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MEGF6O75095 1541 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 RIF1Q5UIP0 2472 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 BCKDKO14874 412 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF536O15090 1300 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NPC1O15118 1278 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 GSC2O15499 205 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 GPR37L1O60883 481 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NME6O75414 186 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 UNC5CO95185 931 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ALPIP09923 528 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CTPS1P17812 591 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CXCR1P25024 350 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 RYKP34925 604 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TXNL4AP83876 142 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 OC90Q02509 493 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 IL10RBQ08334 325 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SP140Q13342 867 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SPIN4Q56A73 249 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ALG10BQ5I7T1 473 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PGM2L1Q6PCE3 622 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SLC29A4Q7RTT9 530 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SPAG16Q8N0X2 631 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 AKAP1Q92667 903 aaKnown RBP eCLIP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NUS1Q96E22 293 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TSSK3Q96PN8 268 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 FAM129BQ96TA1 746 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 HNRNPABQ99729 332 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PELOQ9BRX2 385 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NIFKQ9BYG3 293 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 KIF13AQ9H1H9 1805 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TIGARQ9NQ88 270 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 BLOC1S4Q9NUP1 217 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 FBXW2Q9UKT8 454 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NDRG2Q9UN36 371 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PCDHA2Q9Y5H9 948 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 AK5Q9Y6K8 562 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 AKAP6Q13023 2319 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 LRRC10BA6NIK2 292 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 A8MX80 341 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MAGEB17A8MXT2 336 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 STBD1O95210 358 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 GPIP06744 558 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NT5EP21589 574 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 L1CAMP32004 1257 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MPIP34949 423 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SUOXP51687 545 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PLGLB1Q02325 96 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PPP3CAQ08209 521 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 C15orf59Q2T9L4 293 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 KIAA0930Q6ICG6 404 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 C3P1Q6ZMU1 363 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SLC9B2Q86UD5 537 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TCEAL3Q969E4 200 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 EXOC2Q96KP1 924 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SAMD11Q96NU1 681 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 HSD17B14Q9BPX1 270 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 IPPKQ9H8X2 491 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ALKBH4Q9NXW9 302 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SMPD3Q9NY59 655 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PADI3Q9ULW8 664 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CLEC4AQ9UMR7 237 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 KIAA1210Q9ULL0 1709 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 E9PAM4 449 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 OR1F1O43749 312 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PGLSO95336 258 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PGRP06401 933 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ADRB2P07550 413 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PABPC4LP0CB38 370 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 IL7RP16871 459 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ITIH1P19827 911 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SLC15A1P46059 708 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 POLR2JP52435 117 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PLP2Q04941 152 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CHIT1Q13231 466 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ITGB3BPQ13352 177 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ENPP2Q13822 863 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SEC23BQ15437 767 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MED22Q15528 200 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TAF1AQ15573 450 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 C3orf33Q6P1S2 294 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CES3Q6UWW8 571 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms