RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 RHBDL2Q9NX52 303 aa11.11□□□□□ -0.63
USP6NL-201ENST00000277575 FBXW2Q9UKT8 454 aa11.11□□□□□ -0.63
USP6NL-201ENST00000277575 FADS3Q9Y5Q0 445 aa11.11□□□□□ -0.63
USP6NL-201ENST00000277575 TRIM43BA6NCK2 446 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 MYADML2A6NDP7 307 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 CAPN8A6NHC0 703 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 PRAMEF11O60813 436 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 KERAO60938 352 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 NRIP1P48552 1158 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 BLKP51451 505 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 HERVK_113P63132 956 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 GALNT18Q6P9A2 607 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 HMGB4Q8WW32 186 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 SIGLEC10Q96LC7 697 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 SLC38A3Q99624 504 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 PAAF1Q9BRP4 392 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 ZSCAN5AQ9BUG6 496 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 ERVK-6Q9BXR3 956 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 DENND2DQ9H6A0 471 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 CARS2Q9HA77 564 aaKnown RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 ITM2CQ9NQX7 267 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 OGDHLQ9ULD0 1010 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 COL2A1P02458 1487 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 RHPN2P1A8MT19 583 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 KDELR3O43731 214 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 UGT2B17O75795 530 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 BEST1O76090 585 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 NELFEP18615 380 aaKnown RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 CCNA2P20248 432 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 EFNA1P20827 205 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 TPP2P29144 1249 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 PRDX6P30041 224 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 CCNFP41002 786 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 GCNT6Q5T4J0 391 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 REP15Q6BDI9 236 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 TRAF7Q6Q0C0 670 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 CACTIN-AS1Q8N1I8 211 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 GLB1L3Q8NCI6 653 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 ZCCHC10Q8TBK6 192 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 TMEM40Q8WWA1 233 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 RBM18Q96H35 190 aaKnown RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 TAS2R1Q9NYW7 299 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 KCTD3Q9Y597 815 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 MYH11P35749 1972 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 KDM3BQ7LBC6 1761 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 RBM47A0AV96 593 aaKnown RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 HAS3O00219 553 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 ERN1O75460 977 aaKnown RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 TCEAL1Q15170 157 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 RAB30Q15771 203 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 SLC44A4Q53GD3 710 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 RINLQ6ZS11 566 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 CYP2U1Q7Z449 544 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 HIPK1Q86Z02 1210 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 WDTC1Q8N5D0 677 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 AMER2Q8N7J2 671 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 PXYLP1Q8TE99 480 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 PPP1R14AQ96A00 147 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 PRDM8Q9NQV8 689 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 DNAJC25-GNG10A0A024R161 153 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 A8MUI8 341 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 CHRNA1P02708 482 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 IQCF3P0C7M6 154 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 ALOX12P18054 663 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 STXBP1P61764 594 aaKnown RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 XIAPP98170 497 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 SRSF11Q05519 484 aaKnown RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 NR1D2Q14995 579 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 TMEM198Q66K66 360 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 C22orf39Q6P5X5 142 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 PIGWQ7Z7B1 504 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 FAM129CQ86XR2 697 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 SCAIQ8N9R8 606 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 OR10T2Q8NGX3 314 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 OR10A6Q8NH74 314 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 SLC13A3Q8WWT9 602 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 RAD9AQ99638 391 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 SMG9Q9H0W8 520 aaKnown RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 MUC13Q9H3R2 512 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 PALMDQ9NP74 551 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 MRTO4Q9UKD2 239 aaKnown RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 PAIP2BQ9ULR5 123 aaKnown RBP11.1□□□□□ -0.63
USP6NL-201ENST00000277575 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
USP6NL-201ENST00000277575 A8MT66 165 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 UPK3BL1B0FP48 263 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 UPK3BL2E5RIL1 263 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 LEFTY2O00292 366 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 ECI2O75521 394 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 WFS1O76024 890 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 GJB5O95377 273 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 EPOP01588 193 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 NR2F6P10588 404 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 MTHFRP42898 656 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 AP1S2P56377 157 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 C1QTNF8P60827 252 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 LSM3P62310 102 aaKnown RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 CYP4F3Q08477 520 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 ZBTB6Q15916 424 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 KLHL12Q53G59 568 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms