RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 ISM1B1AKI9 464 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 NDST2P52849 883 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 EEFSECP57772 596 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CNTN2Q02246 1040 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SYVN1Q86TM6 617 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 XYLT1Q86Y38 959 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 GPR135Q8IZ08 494 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 BANPQ8N9N5 519 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PNLDC1Q8NA58 520 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ATAD1Q8NBU5 361 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CDH7Q9ULB5 785 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 RPH3AQ9Y2J0 694 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 COL5A2P05997 1499 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 MATN4O95460 622 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ESR1P03372 595 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ITPKAP23677 461 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 IL12BP29460 328 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CLCQ05315 142 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 TUBB3Q13509 450 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CRTC2Q53ET0 693 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SCIMPQ6UWF3 145 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PRICKLE1Q96MT3 831 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PURBQ96QR8 312 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 NELFEP18615 380 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 YBEYP58557 167 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 XKR4Q5GH76 650 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 KCNK18Q7Z418 384 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 GALNT13Q8IUC8 556 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 TMEM126BQ8IUX1 230 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 EZH1Q92800 747 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ZBED6CLQ96FA7 236 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 WDR18Q9BV38 432 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 B3GALT2O43825 422 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CILPO75339 1184 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ANXA4P09525 319 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ACVR2AP27037 513 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 HERVK_113P63132 956 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ZBED5Q49AG3 693 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 LPCAT4Q643R3 524 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SLC25A25Q6KCM7 469 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 RALGPS2Q86X27 583 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PLD5Q8N7P1 536 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SPPL2BQ8TCT7 592 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 C2orf15Q8WU43 125 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CORO1BQ9BR76 489 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ERVK-6Q9BXR3 956 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 WDR37Q9Y2I8 494 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 RCCD1A6NED2 376 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 MFSD11O43934 449 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ECHS1P30084 290 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ADRA1BP35368 520 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PTGER3P43115 390 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 EIF2S3LQ2VIR3 472 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 IL23RQ5VWK5 629 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 LINGO2Q7L985 606 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SDR16C5Q8N3Y7 309 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 OR4K2Q8NGD2 314 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 GEMIN6Q8WXD5 167 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 LRRC3Q9BY71 257 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SLC29A3Q9BZD2 475 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 MTFR1LQ9H019 292 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CNTNAP1P78357 1384 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 AQP12BA6NM10 295 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ENTPD6O75354 484 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ITGA10O75578 1167 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 RLN2P04090 185 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 S100A2P29034 98 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SEPHS1P49903 392 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 MPP1Q00013 466 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 C1orf189Q5VU69 101 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ALKBH2Q6NS38 261 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 AQP12AQ8IXF9 295 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 TMEM199Q8N511 208 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 AZIN2Q96A70 460 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 C5orf34Q96MH7 638 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 KCTD7Q96MP8 289 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PRDM4Q9UKN5 801 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CNOT6Q9ULM6 557 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 A0A1B0GVM2 712 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 TCAF2A6NFQ2 919 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 PDPK1O15530 556 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 RENP00797 406 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 MSL3P1P0C860 447 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 IFI30P13284 250 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 HADHBP55084 474 aaKnown RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 BTN3A2P78410 334 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 SMAD3P84022 425 aaKnown RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 RNF220Q5VTB9 566 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 LRRC69Q6ZNQ3 347 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ADGRD2Q7Z7M1 963 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 MAGEH1Q9H213 219 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 CHMP1AQ9HD42 196 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 POFUT2Q9Y2G5 429 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ILVBLA1L0T0 632 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 DPPA5A6NC42 116 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 TISP43B9A030 160 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 C2P06681 752 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 EPCAMP16422 314 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 IDH3AP50213 366 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ADAM15Q13444 863 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms