RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 PDZK1P1A8MUH7 402 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 PER2O15055 1255 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 EPOP01588 193 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 CSF2RAP15509 400 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 CAPN3P20807 821 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 RPL10P27635 214 aaKnown RBP12.35□□□□□ -0.43
HERC6-201ENST00000264346 GRIA2P42262 883 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 RAD23AP54725 363 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 DNAJB13P59910 316 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 ERVK-8P63133 956 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 TNK2Q07912 1038 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 LSAMPQ13449 338 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 DSC3Q14574 896 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 CARTPTQ16568 116 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 PIGGQ5H8A4 983 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 SPANXN4Q5MJ08 99 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 CCDC149Q6ZUS6 474 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 CHST9Q7L1S5 443 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 NANOGNBQ7Z5D8 188 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 TMPRSS11BQ86T26 416 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 TNIP2Q8NFZ5 429 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 NUDT8Q8WV74 236 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 DGCR14Q96DF8 476 aaKnown RBP12.35□□□□□ -0.43
HERC6-201ENST00000264346 BTBD9Q96Q07 612 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 FAM83DQ9H4H8 585 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 MRM3Q9HC36 420 aaKnown RBP12.35□□□□□ -0.43
HERC6-201ENST00000264346 PNPLA3Q9NST1 481 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 TMCO1Q9UM00 188 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 TBC1D30Q9Y2I9 924 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 LSM1O15116 133 aaKnown RBP12.35□□□□□ -0.43
HERC6-201ENST00000264346 DIRAS1O95057 198 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 GBAP04062 536 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 MAPK1P28482 360 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 SLC7A1P30825 629 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 GPC1P35052 558 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 ADRA1AP35348 466 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 IDH2P48735 452 aaKnown RBP12.35□□□□□ -0.43
HERC6-201ENST00000264346 CLK1P49759 484 aaKnown RBP12.35□□□□□ -0.43
HERC6-201ENST00000264346 RING1Q06587 406 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 DCTN2Q13561 401 aaKnown RBP12.35□□□□□ -0.43
HERC6-201ENST00000264346 C6orf136Q5SQH8 315 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 ZNF549Q6P9A3 640 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 TMEM26Q6ZUK4 368 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 GOLGA7Q7Z5G4 137 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 SLC39A13Q96H72 371 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 ADI1Q9BV57 179 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 CLK4Q9HAZ1 481 aaKnown RBP12.35□□□□□ -0.43
HERC6-201ENST00000264346 CACYBPQ9HB71 228 aaKnown RBP12.35□□□□□ -0.43
HERC6-201ENST00000264346 TNFRSF12AQ9NP84 129 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 KCTD5Q9NXV2 234 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 NUDT4Q9NZJ9 180 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 PADI4Q9UM07 663 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 CROCCQ5TZA2 2017 aa12.35□□□□□ -0.43
HERC6-201ENST00000264346 CLDN9O95484 217 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 GPR1P46091 355 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 RFX3P48380 749 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 DAB2P98082 770 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 DMPKQ09013 629 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 Q6ZVL8 140 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 KBTBD6Q86V97 674 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 GLMNQ92990 594 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 FBXL20Q96IG2 436 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 C1QTNF1Q9BXJ1 281 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 DERL2Q9GZP9 239 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 RASSF1Q9NS23 344 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 IMPAD1Q9NX62 359 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 TLL1O43897 1013 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 RFPL2O75678 378 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 EPN2O95208 641 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 ATXN1LP0C7T5 689 aaKnown RBP12.34□□□□□ -0.43
HERC6-201ENST00000264346 COL6A1P12109 1028 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 FDXRP22570 491 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 HNF1BP35680 557 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 MAPK8P45983 427 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 APLP1P51693 650 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 TUBB3Q13509 450 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 HERC3Q15034 1050 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 TMEM207Q6UWW9 146 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 BNIPLQ7Z465 357 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 APLFQ8IW19 511 aaPredicted RBP12.34□□□□□ -0.43
HERC6-201ENST00000264346 SLC15A3Q8IY34 581 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 CFAP206Q8IYR0 622 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 FUBP1Q96AE4 644 aaKnown RBP12.34□□□□□ -0.43
HERC6-201ENST00000264346 SLC30A3Q99726 388 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 KRT87PA6NCN2 255 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 hCG_2039718K7EN88 272 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 TEX28O15482 410 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 PRKACGP22612 351 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 PCSK6P29122 969 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 PRKAG1P54619 331 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 XIAPP98170 497 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 ABRAXAS1Q6UWZ7 409 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 TMC5Q6UXY8 1006 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 SNX20Q7Z614 316 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 RAVER1Q8IY67 606 aaKnown RBP12.34□□□□□ -0.43
HERC6-201ENST00000264346 ADGRG2Q8IZP9 1017 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 OR2AP1Q8NGE2 309 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 SLC13A3Q8WWT9 602 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 ROPN1LQ96C74 230 aa12.34□□□□□ -0.43
HERC6-201ENST00000264346 AP2M1Q96CW1 435 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms