RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CIB1Q99828 191 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 BDH2Q9BUT1 245 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 POLR1BQ9H9Y6 1135 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 POLR3HQ9Y535 204 aaPredicted RBP16.03■□□□□ 0.16
CTCF-201ENST00000264010 PTGDR2Q9Y5Y4 395 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 A0A0J9YVX5 310 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 ZNF197O14709 1029 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 MSH3P20585 1137 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 LIPEQ05469 1076 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 TNK2Q07912 1038 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 MTX3Q5HYI7 312 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 SULT1C3Q6IMI6 304 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 RAVER1Q8IY67 606 aaKnown RBP16.03■□□□□ 0.16
CTCF-201ENST00000264010 VPS33AQ96AX1 596 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 TRMT2BQ96GJ1 504 aaKnown RBP16.03■□□□□ 0.16
CTCF-201ENST00000264010 REXO4Q9GZR2 422 aaKnown RBP16.03■□□□□ 0.16
CTCF-201ENST00000264010 CWH43Q9H720 699 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 RMND5AQ9H871 391 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 PTTG2Q9NZH5 202 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 PCDHGA7Q9Y5G6 932 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 FAM234BA2RU67 622 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 AQP12BA6NM10 295 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 TBC1D4O60343 1298 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 KCNH1O95259 989 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 ENO2P09104 434 aaPredicted RBP16.03■□□□□ 0.16
CTCF-201ENST00000264010 HMGCLP35914 325 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 FAM98BQ52LJ0 330 aaKnown RBP16.03■□□□□ 0.16
CTCF-201ENST00000264010 CHSY3Q70JA7 882 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 AQP12AQ8IXF9 295 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 RNF145Q96MT1 663 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 HERC2P3Q9BVR0 1158 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 RGS5O15539 181 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 CLDN7O95471 211 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 C8AP07357 584 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 FOXM1Q08050 763 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 OTUD3Q5T2D3 398 aaPredicted RBP16.02■□□□□ 0.16
CTCF-201ENST00000264010 ZDHHC20Q5W0Z9 365 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 SYVN1Q86TM6 617 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 TSPEARQ8WU66 669 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 ZNF382Q96SR6 550 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 CHID1Q9BWS9 393 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 ZDHHC7Q9NXF8 308 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 PCDHGA4Q9Y5G9 962 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 A0A1W2PP18 115 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 PTGES3LE9PB15 166 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 IDH3BO43837 385 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 ALBP02768 609 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 UGT2B4P06133 528 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 CCL5P13501 91 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 SEPHS1P49903 392 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 CHRNA6Q15825 494 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 PGS1Q32NB8 556 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 TMEM199Q8N511 208 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 OR2AP1Q8NGE2 309 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 GRIN3AQ8TCU5 1115 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 SELENOMQ8WWX9 145 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 SNX19Q92543 992 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 CDK15Q96Q40 435 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 SMIM14Q96QK8 99 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 HBEGFQ99075 208 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 COQ10BQ9H8M1 238 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 ZIM2Q9NZV7 527 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 IL17CQ9P0M4 197 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 SPEF1Q9Y4P9 236 aa16.02■□□□□ 0.16
CTCF-201ENST00000264010 STK16O75716 305 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 GSTT2P0CG29 244 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 GSTT2BP0CG30 244 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 POLR2EP19388 210 aaKnown RBP16.02■□□□□ 0.15
CTCF-201ENST00000264010 NSG1P42857 185 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 ST13P50502 369 aaKnown RBP16.02■□□□□ 0.15
CTCF-201ENST00000264010 RAD23AP54725 363 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 DIO3P55073 304 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 ARF5P84085 180 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 MAPKAPK3Q16644 382 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 PELI3Q8N2H9 469 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 GATA6Q92908 595 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 MRPS26Q9BYN8 205 aaKnown RBP16.02■□□□□ 0.15
CTCF-201ENST00000264010 ALG2Q9H553 416 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 DGKBQ9Y6T7 804 aa16.02■□□□□ 0.15
CTCF-201ENST00000264010 A0A1W2PQ67 120 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 EVPLLA8MZ36 301 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 IFRD1O00458 451 aaPredicted RBP16.01■□□□□ 0.15
CTCF-201ENST00000264010 SH3BP5O60239 455 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 SOCS5O75159 536 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 POP4O95707 220 aaKnown RBP16.01■□□□□ 0.15
CTCF-201ENST00000264010 GLUD1P00367 558 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 SUOXP51687 545 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 GATAD2AQ86YP4 633 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 TCEAL8Q8IYN2 117 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 CLDN19Q8N6F1 224 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 ST13P5Q8NFI4 369 aaPredicted RBP16.01■□□□□ 0.15
CTCF-201ENST00000264010 SHKBP1Q8TBC3 707 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 MYRFLQ96LU7 910 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 TRIB3Q96RU7 358 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 ZFP14Q9HCL3 533 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 ABCB8Q9NUT2 735 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 ZNHIT2Q9UHR6 403 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 AP3M1Q9Y2T2 418 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 A0A1W2PRU2 124 aa16.01■□□□□ 0.15
CTCF-201ENST00000264010 PPP6CO00743 305 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms