RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 BRCC3P46736 316 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 DGKEP52429 567 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 MAB21L1Q13394 359 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 OCLNQ16625 522 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 TSTQ16762 297 aaKnown RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 FAM92BQ6ZTR7 304 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SPERTQ8NA61 448 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF607Q96SK3 696 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CDK5RAP1Q96SZ6 601 aaKnown RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 C1orf21Q9H246 121 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 BEX1Q9HBH7 125 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 TVP23BQ9NYZ1 205 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PHF24Q9UPV7 400 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PCDHB9Q9Y5E1 797 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 XRN1Q8IZH2 1706 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 GLDCP23378 1020 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ASPAP45381 313 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 TAS2R39P59534 338 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 GRSF1Q12849 480 aaKnown RBP eCLIP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF404Q494X3 552 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ANXA8L1Q5VT79 327 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 SPAG16Q8N0X2 631 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 GRIN3AQ8TCU5 1115 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 SMG7Q92540 1137 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ST3GAL5Q9UNP4 418 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ERVK-11Q9UQG0 969 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 LTN1O94822 1766 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 NRCAMQ92823 1304 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 FXYD6-FXYD2A0A087WZ82 144 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 OGDHQ02218 1023 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 DSC2Q02487 901 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF234Q14588 700 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 TCEA2Q15560 299 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 TRPV3Q8NET8 790 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 FCGR1BQ92637 280 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 CCDC3Q9BQI4 270 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 AARSD1Q9BTE6 412 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 SPATA5L1Q9BVQ7 753 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 FXYD6Q9H0Q3 95 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZDHHC2Q9UIJ5 367 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 TRPV2Q9Y5S1 764 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 SPIN1Q9Y657 262 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 LOC100130705A0A1B0GUX0 176 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 INMTO95050 263 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ECHS1P30084 290 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 LAPTM4AQ15012 233 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZBTB6Q15916 424 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 FAM174BQ3ZCQ3 159 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 PDE12Q6L8Q7 609 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 TAPT1Q6NXT6 567 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF730Q6ZMV8 503 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 PRR11Q96HE9 360 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 GPR21Q99679 349 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 IPPKQ9H8X2 491 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 POLR3BQ9NW08 1133 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 PPIEQ9UNP9 301 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 AQP12BA6NM10 295 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 NARSO43776 548 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 CATP04040 527 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 HTR2BP41595 481 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 OLIG2Q13516 323 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 GANABQ14697 944 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ACAP2Q15057 778 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 PLA2G4EQ3MJ16 856 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF773Q6PK81 442 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 IGDCC3Q8IVU1 814 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 AQP12AQ8IXF9 295 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 OR9I1Q8NGQ6 314 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 FRMD6Q96NE9 622 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 WACQ9BTA9 647 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 TAS2R7Q9NYW3 318 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF69Q9UC07 566 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 SIGLEC1Q9BZZ2 1709 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 IFT172Q9UG01 1749 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 DCCP43146 1447 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ABHD14A-ACY1A0A1B0GW23 586 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 A6NHS1 94 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 CCNB2O95067 398 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 TCEA1P23193 301 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 LMO2P25791 158 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 HSPA7P48741 367 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 LCP2Q13094 533 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 PLEKHG4Q58EX7 1191 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 TREML2Q5T2D2 321 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 DCLRE1AQ6PJP8 1040 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF438Q7Z4V0 828 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 DEFB132Q7Z7B7 95 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 DEFB128Q7Z7B8 93 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 IPCEF1Q8WWN9 437 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 CLEC4DQ8WXI8 215 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 GPR20Q99678 358 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 WDR6Q9NNW5 1121 aaKnown RBP9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 TREM1Q9NP99 234 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 SEC14L3Q9UDX4 400 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 CFL2Q9Y281 166 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 TCAF1Q9Y4C2 921 aa9.61□□□□□ -0.87
CTDSPL2-201ENST00000260327 IRGMA1A4Y4 181 aa9.6□□□□□ -0.87
CTDSPL2-201ENST00000260327 CXCL11O14625 94 aa9.6□□□□□ -0.87
CTDSPL2-201ENST00000260327 UROSP10746 265 aa9.6□□□□□ -0.87
CTDSPL2-201ENST00000260327 CXCR3P49682 368 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms