RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 SYT12Q8IV01 421 aa15.29■□□□□ 0.04
GYPC-201ENST00000259254 CENPLQ8N0S6 344 aaPredicted RBP15.29■□□□□ 0.04
GYPC-201ENST00000259254 LILRA3Q8N6C8 439 aaPredicted RBP15.29■□□□□ 0.04
GYPC-201ENST00000259254 CCDC63Q8NA47 563 aa15.29■□□□□ 0.04
GYPC-201ENST00000259254 MGARPQ8TDB4 240 aa15.29■□□□□ 0.04
GYPC-201ENST00000259254 TCP10LQ8TDR4 215 aa15.29■□□□□ 0.04
GYPC-201ENST00000259254 LOXL4Q96JB6 756 aa15.29■□□□□ 0.04
GYPC-201ENST00000259254 UBXN10Q96LJ8 280 aa15.29■□□□□ 0.04
GYPC-201ENST00000259254 ZNF358Q9NW07 568 aa15.29■□□□□ 0.04
GYPC-201ENST00000259254 DLL3Q9NYJ7 618 aa15.29■□□□□ 0.04
GYPC-201ENST00000259254 PILRBQ9UKJ0 227 aa15.29■□□□□ 0.04
GYPC-201ENST00000259254 LRRK1Q38SD2 2015 aa15.29■□□□□ 0.04
GYPC-201ENST00000259254 THADAQ6YHU6 1953 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 SLC5A10A0PJK1 596 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 NPEPPSL1A6NEC2 478 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 PDZK1P1A8MUH7 402 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 EIF3FO00303 357 aaPredicted RBP15.28■□□□□ 0.04
GYPC-201ENST00000259254 PRPF4O43172 522 aaKnown RBP eCLIP15.28■□□□□ 0.04
GYPC-201ENST00000259254 TYROBPO43914 113 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 SNX2O60749 519 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 KCNJ13O60928 360 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 GPC4O75487 556 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 EPN2O95208 641 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 CFIP05156 583 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 SLC35G4P0C7Q5 338 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 CD1DP15813 335 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 JUNDP17535 347 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 IDSP22304 550 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 RPA3P35244 121 aaPredicted RBP15.28■□□□□ 0.04
GYPC-201ENST00000259254 DPP6P42658 865 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 CTBSQ01459 385 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 PLOD1Q02809 727 aaPredicted RBP15.28■□□□□ 0.04
GYPC-201ENST00000259254 ILF3Q12906 894 aaKnown RBP eCLIP15.28■□□□□ 0.04
GYPC-201ENST00000259254 LRP8Q14114 963 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 CSRP2Q16527 193 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 CDHR3Q6ZTQ4 885 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 VRK3Q8IV63 474 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 CFAP61Q8NHU2 1237 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 DERL2Q9GZP9 239 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 TMEM168Q9H0V1 697 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 TCEAL2Q9H3H9 227 aaPredicted RBP15.28■□□□□ 0.04
GYPC-201ENST00000259254 C12orf65Q9H3J6 166 aaKnown RBP15.28■□□□□ 0.04
GYPC-201ENST00000259254 ALG9Q9H6U8 611 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 SEMA4GQ9NTN9 838 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 TMEM74BQ9NUR3 256 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 TRNAU1APQ9NX07 287 aaKnown RBP15.28■□□□□ 0.04
GYPC-201ENST00000259254 TMEM216Q9P0N5 145 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 APOBEC3BQ9UH17 382 aaKnown RBP15.28■□□□□ 0.04
GYPC-201ENST00000259254 PNMA8BQ9ULN7 279 aaPredicted RBP15.28■□□□□ 0.04
GYPC-201ENST00000259254 DGKBQ9Y6T7 804 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 WDR87Q6ZQQ6 2873 aa15.28■□□□□ 0.04
GYPC-201ENST00000259254 CEP250Q9BV73 2442 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 PABPN1LA6NDY0 278 aaKnown RBP15.27■□□□□ 0.04
GYPC-201ENST00000259254 CDC7O00311 574 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 ZBTB14O43829 449 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 TSPAN12O95859 305 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 MPC1LP0DKB6 136 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 SDHBP21912 280 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 PDHA2P29803 388 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 ACTR1BP42025 376 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 ACTR1AP61163 376 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 FOXK2Q01167 660 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 DMPKQ09013 629 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 ABRQ12979 859 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 RPA4Q13156 261 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 GBX1Q14549 363 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 ACAP2Q15057 778 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 PRR23CQ6ZRP0 262 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 FRA10AC1Q70Z53 315 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 RABEPKQ7Z6M1 372 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 SLC22A15Q8IZD6 547 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 ARFGAP2Q8N6H7 521 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 FAM76AQ8TAV0 307 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 EXT2Q93063 718 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 FOPNLQ96NB1 174 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 FAM111AQ96PZ2 611 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 PAIP2Q9BPZ3 127 aaKnown RBP15.27■□□□□ 0.04
GYPC-201ENST00000259254 GSDMCQ9BYG8 508 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 WWP1Q9H0M0 922 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 CPSF2Q9P2I0 782 aaKnown RBP15.27■□□□□ 0.04
GYPC-201ENST00000259254 SLC17A7Q9P2U7 560 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 XPR1Q9UBH6 696 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 ACSL5Q9ULC5 683 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 PSMD13Q9UNM6 376 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 CDYLQ9Y232 598 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 PLLPQ9Y342 182 aa15.27■□□□□ 0.04
GYPC-201ENST00000259254 TNRC6BQ9UPQ9 1833 aaKnown RBP15.27■□□□□ 0.03
GYPC-201ENST00000259254 IFRD1O00458 451 aaPredicted RBP15.26■□□□□ 0.03
GYPC-201ENST00000259254 TM9SF1O15321 606 aa15.26■□□□□ 0.03
GYPC-201ENST00000259254 SLCO2B1O94956 709 aa15.26■□□□□ 0.03
GYPC-201ENST00000259254 ZWINTO95229 277 aa15.26■□□□□ 0.03
GYPC-201ENST00000259254 CSF2P04141 144 aa15.26■□□□□ 0.03
GYPC-201ENST00000259254 RBP1P09455 135 aa15.26■□□□□ 0.03
GYPC-201ENST00000259254 NME1P15531 152 aaKnown RBP15.26■□□□□ 0.03
GYPC-201ENST00000259254 AK4P27144 223 aaPredicted RBP15.26■□□□□ 0.03
GYPC-201ENST00000259254 ATP1A2P50993 1020 aa15.26■□□□□ 0.03
GYPC-201ENST00000259254 CLCNKAP51800 687 aa15.26■□□□□ 0.03
GYPC-201ENST00000259254 C1orf61Q13536 156 aa15.26■□□□□ 0.03
GYPC-201ENST00000259254 TSNQ15631 228 aaKnown RBP15.26■□□□□ 0.03
GYPC-201ENST00000259254 KIF19Q2TAC6 998 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms