RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 USP30Q70CQ3 517 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 BEND5Q7L4P6 421 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 ERI1Q8IV48 349 aaKnown RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 SLC25A36Q96CQ1 311 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 ZBTB45Q96K62 511 aaPredicted RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 C8orf48Q96LL4 319 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 BEX2Q9BXY8 128 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 BEX1Q9HBH7 125 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 M0R233 179 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 PROSCO94903 275 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 INHAP05111 366 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 SAGP10523 405 aaPredicted RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 CDH1P12830 882 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 RPL17P18621 184 aaKnown RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 CYP3A5P20815 502 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 CBLP22681 906 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 NRIP1P48552 1158 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 BDH1Q02338 343 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 SLC18A2Q05940 514 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 CDH17Q12864 832 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 PEX6Q13608 980 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 PLGLAQ15195 96 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 KHDC1LQ5JSQ8 128 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 SLC16A9Q7RTY1 509 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 OR8K3Q8NH51 312 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 SPATA5L1Q9BVQ7 753 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 HERC2P3Q9BVR0 1158 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 NECTIN3Q9NQS3 549 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 PDE10AQ9Y233 779 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 WNT10BO00744 389 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 TFPTP0C1Z6 253 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 NIPAL1Q6NVV3 410 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 POGLUT1Q8NBL1 392 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 REPS2Q8NFH8 660 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 OR52J3Q8NH60 311 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 LRTOMTQ8WZ04 291 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 SAT2Q96F10 170 aaPredicted RBP10.96□□□□□ -0.65
MSH6-201ENST00000234420 KAT8Q9H7Z6 458 aaKnown RBP10.96□□□□□ -0.65
MSH6-201ENST00000234420 NANSQ9NR45 359 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 RPL26L1Q9UNX3 145 aaKnown RBP10.96□□□□□ -0.65
MSH6-201ENST00000234420 MED31Q9Y3C7 131 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 CFAP20Q9Y6A4 193 aaKnown RBP10.96□□□□□ -0.65
MSH6-201ENST00000234420 SLC7A1P30825 629 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 CBLBQ13191 982 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 DRAXINQ8NBI3 349 aaPredicted RBP10.96□□□□□ -0.65
MSH6-201ENST00000234420 RPL10LQ96L21 214 aaKnown RBP10.96□□□□□ -0.65
MSH6-201ENST00000234420 OR52E6Q96RD3 313 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 CDH22Q9UJ99 828 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 ARL5AQ9Y689 179 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 MAPKBP1O60336 1514 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 BOLA2-SMG1P6H3BVE0 249 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 E2F3O00716 465 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 RFXANKO14593 260 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 RYKP34925 604 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 FOXK1P85037 733 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 ATXN7L3Q14CW9 347 aaPredicted RBP10.96□□□□□ -0.65
MSH6-201ENST00000234420 SCGB2B2Q4G0G5 96 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 ANO7Q6IWH7 933 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 ASCC1Q8N9N2 400 aaKnown RBP10.96□□□□□ -0.65
MSH6-201ENST00000234420 RTKNQ9BST9 563 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 BIN3Q9NQY0 253 aa10.96□□□□□ -0.65
MSH6-201ENST00000234420 GJB6O95452 261 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 IFNGP01579 166 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 FCER2P06734 321 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 HNRNPLP14866 589 aaKnown RBP eCLIP10.96□□□□□ -0.66
MSH6-201ENST00000234420 CFL1P23528 166 aaKnown RBP10.96□□□□□ -0.66
MSH6-201ENST00000234420 S100PP25815 95 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 C9orf64Q5T6V5 341 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 RIOX2Q8IUF8 465 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 ZCCHC9Q8N567 271 aaKnown RBP10.96□□□□□ -0.66
MSH6-201ENST00000234420 SNX33Q8WV41 574 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 KXD1Q9BQD3 176 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 FAM126AQ9BYI3 521 aaPredicted RBP10.96□□□□□ -0.66
MSH6-201ENST00000234420 PNPOQ9NVS9 261 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 SULT1B1O43704 296 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 ENTPD3O75355 529 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 MATKP42679 507 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 DUPD1Q68J44 220 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 TMEM156Q8N614 296 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 RBM15BQ8NDT2 890 aaKnown RBP10.96□□□□□ -0.66
MSH6-201ENST00000234420 CLP1Q92989 425 aaKnown RBP10.96□□□□□ -0.66
MSH6-201ENST00000234420 HSPA12BQ96MM6 686 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 TEFMQ96QE5 360 aaKnown RBP10.96□□□□□ -0.66
MSH6-201ENST00000234420 AARSD1Q9BTE6 412 aaKnown RBP10.96□□□□□ -0.66
MSH6-201ENST00000234420 PAK6Q9NQU5 681 aaPredicted RBP10.96□□□□□ -0.66
MSH6-201ENST00000234420 EIF2B4Q9UI10 523 aaKnown RBP10.96□□□□□ -0.66
MSH6-201ENST00000234420 HMGXB3Q12766 1538 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 TULP3O75386 442 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 RP2O75695 350 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 AADACL2Q6P093 401 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 TMEM126BQ8IUX1 230 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 ATOH1Q92858 354 aaPredicted RBP10.96□□□□□ -0.66
MSH6-201ENST00000234420 PANX3Q96QZ0 392 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 PCDH18Q9HCL0 1135 aa10.96□□□□□ -0.66
MSH6-201ENST00000234420 H3BUI4 141 aa10.95□□□□□ -0.66
MSH6-201ENST00000234420 VDRP11473 427 aa10.95□□□□□ -0.66
MSH6-201ENST00000234420 CCKBRP32239 447 aa10.95□□□□□ -0.66
MSH6-201ENST00000234420 HTR2BP41595 481 aa10.95□□□□□ -0.66
MSH6-201ENST00000234420 RPS9P46781 194 aaKnown RBP10.95□□□□□ -0.66
MSH6-201ENST00000234420 LIPEQ05469 1076 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms