RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 MATN4O95460 622 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 GPR89BP0CG08 455 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 COL9A1P20849 921 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 MLLT1Q03111 559 aaPredicted RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 CCINQ13939 588 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 WSCD2Q2TBF2 565 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 LSM12Q3MHD2 195 aaKnown RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 PUS10Q3MIT2 529 aaKnown RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 UGT3A2Q3SY77 523 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 BEND7Q8N7W2 519 aaPredicted RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 MCOLN3Q8TDD5 553 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 ASB12Q8WXK4 309 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 SIPA1Q96FS4 1042 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 CCT7Q99832 543 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 CD244Q9BZW8 370 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 WDR55Q9H6Y2 383 aaPredicted RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 TNFRSF12AQ9NP84 129 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 SEMA4BQ9NPR2 832 aaPredicted RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 ARL8BQ9NVJ2 186 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 ARMCX1Q9P291 453 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 ATXN10Q9UBB4 475 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 EIF2B4Q9UI10 523 aaKnown RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 PDE10AQ9Y233 779 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 CBX6O95503 412 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 ASGR2P07307 311 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 TSPAN8P19075 237 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 NCF2P19878 526 aaPredicted RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 EPHA3P29320 983 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 GGT5P36269 586 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 SGCGQ13326 291 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 ZNF658BQ4V348 819 aaPredicted RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 CACUL1Q86Y37 369 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 SLC22A15Q8IZD6 547 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 CPSF7Q8N684 471 aaKnown RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 SKA2Q8WVK7 121 aaPredicted RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 PRR11Q96HE9 360 aaPredicted RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 LRCH3Q96II8 777 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 ZBTB26Q9HCK0 441 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 WWOXQ9NZC7 414 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 TAGLN3Q9UI15 199 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 MMP17Q9ULZ9 603 aa23.31■■□□□ 1.32
RRP9-201ENST00000232888 DNMT3AQ9Y6K1 912 aaPredicted RBP23.31■■□□□ 1.32
RRP9-201ENST00000232888 KLHL33A6NCF5 533 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 TAPBPO15533 448 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 GUCA1CO95843 209 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 ESRRAP11474 423 aaPredicted RBP23.3■■□□□ 1.32
RRP9-201ENST00000232888 RBBP7Q16576 425 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 TMEM259Q4ZIN3 620 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 GPRIN3Q6ZVF9 776 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 VRK3Q8IV63 474 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 OR14C36Q8NHC7 312 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 CDX2Q99626 313 aaPredicted RBP23.3■■□□□ 1.32
RRP9-201ENST00000232888 TEX101Q9BY14 249 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 ARHGEF3Q9NR81 526 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 ARL15Q9NXU5 204 aa23.3■■□□□ 1.32
RRP9-201ENST00000232888 ZFR2Q9UPR6 939 aaKnown RBP23.3■■□□□ 1.32
RRP9-201ENST00000232888 MYO1CO00159 1063 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 VPS4BO75351 444 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 PSIP1O75475 530 aaKnown RBP23.29■■□□□ 1.32
RRP9-201ENST00000232888 CRCPO75575 148 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 CHEK2O96017 543 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 OTCP00480 354 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 UROSP10746 265 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 PTPN4P29074 926 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 PRDX6P30041 224 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 TRIM23P36406 574 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 MNAT1P51948 309 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 ADPRHP54922 357 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 CDK3Q00526 305 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 GTF2H2Q13888 395 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 GPR153Q6NV75 609 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 GTF2H2CQ6P1K8 395 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 HEATR4Q86WZ0 1026 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 HORMAD1Q86X24 394 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 TRAPPC5Q8IUR0 188 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 PLA2G15Q8NCC3 412 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 FOPNLQ96NB1 174 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 OPTCQ9UBM4 332 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 DNAJC15Q9Y5T4 150 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 CAPN7Q9Y6W3 813 aa23.29■■□□□ 1.32
RRP9-201ENST00000232888 SHISA7A6NL88 538 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 PRR5-ARHGAP8B1AHC4 643 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 E9PBE3 544 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 K7EPI3 171 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 PPP6CO00743 305 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 NARSO43776 548 aaKnown RBP23.28■■□□□ 1.32
RRP9-201ENST00000232888 KLHL41O60662 606 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 PCCBP05166 539 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 JUNP05412 331 aaKnown RBP23.28■■□□□ 1.32
RRP9-201ENST00000232888 ARHGAP8P85298 464 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 CLEC6AQ6EIG7 209 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 GOLGA7Q7Z5G4 137 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 TREML1Q86YW5 311 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 RPLP0P6Q8NHW5 317 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 C19orf60Q96EN9 201 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 LENG8Q96PV6 779 aaPredicted RBP23.28■■□□□ 1.32
RRP9-201ENST00000232888 SLC17A9Q9BYT1 436 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 FIS1Q9Y3D6 152 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 F5P12259 2224 aa23.28■■□□□ 1.32
RRP9-201ENST00000232888 CHUKO15111 745 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms