RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 LRG1P02750 347 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 ANXA8P13928 327 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 HPGDP15428 266 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 L1CAMP32004 1257 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 BUD31P41223 144 aaPredicted RBP13.61□□□□□ -0.23
HCFC2-201ENST00000229330 SLC25A11Q02978 314 aaKnown RBP13.61□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF267Q14586 743 aaPredicted RBP13.61□□□□□ -0.23
HCFC2-201ENST00000229330 DCST1Q5T197 706 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 IFNLR1Q8IU57 520 aaPredicted RBP13.61□□□□□ -0.23
HCFC2-201ENST00000229330 SLC37A3Q8NCC5 494 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 C8orf48Q96LL4 319 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 FCRL4Q96PJ5 515 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 RDH8Q9NYR8 311 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 FZD10Q9ULW2 581 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 XRN1Q8IZH2 1706 aaKnown RBP13.61□□□□□ -0.23
HCFC2-201ENST00000229330 KDM4BO94953 1096 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 MT-CYBP00156 380 aaPredicted RBP13.61□□□□□ -0.23
HCFC2-201ENST00000229330 CHRM5P08912 532 aaPredicted RBP13.61□□□□□ -0.23
HCFC2-201ENST00000229330 PROZP22891 400 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 SLC6A4P31645 630 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 SLC39A12Q504Y0 691 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 ITM2CQ9NQX7 267 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 PTCH2Q9Y6C5 1203 aa13.61□□□□□ -0.23
HCFC2-201ENST00000229330 MYH10P35580 1976 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF879B4DU55 563 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 SLITRK5O94991 958 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 CCNYL3P0C7X3 344 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 MYCLP1P12525 358 aaPredicted RBP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 HOXD13P35453 343 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 DEFA5Q01523 94 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 ATP6AP1Q15904 470 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 PEG10Q86TG7 708 aaKnown RBP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 ANKFN1Q8N957 763 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 C1orf127Q8N9H9 656 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF641Q96N77 438 aaPredicted RBP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 KCNN2Q9H2S1 579 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 C1orf109Q9NX04 203 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 NR2E3Q9Y5X4 410 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 COL14A1Q05707 1796 aaKnown RBP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 AP3D1O14617 1153 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 CLDN9O95484 217 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 GSTT2P0CG29 244 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 GSTT2BP0CG30 244 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 GM2AP17900 193 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 PPP1R8Q12972 351 aaKnown RBP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 TREML2Q5T2D2 321 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 DOK6Q6PKX4 331 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 SLITRK4Q8IW52 837 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 OR4K2Q8NGD2 314 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 NDRG1Q92597 394 aaKnown RBP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 SIGLEC10Q96LC7 697 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 CHIAQ9BZP6 476 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 RACGAP1Q9H0H5 632 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 MED11Q9P086 117 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 SPEF2Q9C093 1822 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 CCL22O00626 93 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 ERN1O75460 977 aaKnown RBP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 PRPS2P11908 318 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 DNAJB1P25685 340 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 GRM5P41594 1212 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 OGDHQ02218 1023 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 IFI44LQ53G44 452 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 ABHD15Q6UXT9 468 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 C16orf59Q7L2K0 433 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 DAW1Q8N136 415 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 CSGALNACT1Q8TDX6 532 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 STYXQ8WUJ0 223 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF516Q92618 1163 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 PGLYRP2Q96PD5 576 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 SLC9A7Q96T83 725 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 ZCCHC2Q9C0B9 1178 aaKnown RBP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 TBC1D17Q9HA65 648 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 PAQR5Q9NXK6 330 aaPredicted RBP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 ZIM2Q9NZV7 527 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 NUP50Q9UKX7 468 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 E7ESA3 106 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 PMS2P3Q13401 168 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 SLC7A5P1Q8MH63 180 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 AKAP1Q92667 903 aaKnown RBP eCLIP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 KCTD7Q96MP8 289 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 SACM1LQ9NTJ5 587 aa13.6□□□□□ -0.23
HCFC2-201ENST00000229330 RPL36Q9Y3U8 105 aaKnown RBP13.6□□□□□ -0.23
HCFC2-201ENST00000229330 A0A1W2PP18 115 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 C12orf71A8MTZ7 269 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 MAGEB17A8MXT2 336 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 CHURC1-FNTBB4DL54 471 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 STK25O00506 426 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 SLC7A4O43246 635 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 ASMTP46597 345 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 HSPA7P48741 367 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 NKX2-5P52952 324 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 TAS2R41P59536 307 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 LAPTM5Q13571 262 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 TSTQ16762 297 aaKnown RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 C6orf141Q5SZD1 244 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 UBAP2Q5T6F2 1119 aaKnown RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 OR2T5Q6IEZ7 315 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 DCDC5Q6ZRR9 648 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 USP45Q70EL2 814 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms