RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PTRHD1Q6GMV3 140 aaKnown RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 MRNIPQ6NTE8 343 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 SDCCAG8Q86SQ7 713 aaPredicted RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 RSC1A1Q92681 617 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 TRIM44Q96DX7 344 aaPredicted RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 SNF8Q96H20 258 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 FERD3LQ96RJ6 166 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 NRTNQ99748 197 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 EBNA1BP2Q99848 306 aaKnown RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 P2RY12Q9H244 342 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 DPH5Q9H2P9 285 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 DKK4Q9UBT3 224 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 PISDQ9UG56 409 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 RAXQ9Y2V3 346 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 LOXL2Q9Y4K0 774 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 DMXL2Q8TDJ6 3036 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 SLC5A10A0PJK1 596 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 FAM187AA6NFU0 413 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
LSM5-201ENST00000223084 QSOX1O00391 747 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 LIN7AO14910 233 aaPredicted RBP12.37□□□□□ -0.43
LSM5-201ENST00000223084 PLD2O14939 933 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 TNFSF15O95150 251 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 GSTM1P09488 218 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 CCL4P13236 92 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 PGAM1P18669 254 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 OGNP20774 298 aaKnown RBP12.37□□□□□ -0.43
LSM5-201ENST00000223084 FMO4P31512 558 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 LEPRP48357 1165 aaKnown RBP12.37□□□□□ -0.43
LSM5-201ENST00000223084 PPP1CAP62136 330 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 GSTM4Q03013 218 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 RPA4Q13156 261 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 CTBP1Q13363 440 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 THOC5Q13769 683 aaKnown RBP12.37□□□□□ -0.43
LSM5-201ENST00000223084 KRT33BQ14525 404 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 PLCL1Q15111 1095 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 LONRF1Q17RB8 773 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 SYTL3Q4VX76 610 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 ZNF789Q5FWF6 425 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 CTSL3PQ5NE16 218 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 ZNF470Q6ECI4 717 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 WDR74Q6RFH5 385 aaPredicted RBP12.37□□□□□ -0.43
LSM5-201ENST00000223084 CENPUQ71F23 418 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 PROSER1Q86XN7 944 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 CILP2Q8IUL8 1156 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 VRK3Q8IV63 474 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 DENND6AQ8IWF6 608 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 RBM12BQ8IXT5 1001 aaKnown RBP12.37□□□□□ -0.43
LSM5-201ENST00000223084 LPGAT1Q92604 370 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 SLC46A1Q96NT5 459 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 TGM7Q96PF1 710 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 DPYSL5Q9BPU6 564 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 WDR83Q9BRX9 315 aaKnown RBP12.37□□□□□ -0.43
LSM5-201ENST00000223084 CARD6Q9BX69 1037 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 ASCL3Q9NQ33 180 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 C20orf96Q9NUD7 363 aaPredicted RBP12.37□□□□□ -0.43
LSM5-201ENST00000223084 SLC24A2Q9UI40 661 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 CDC23Q9UJX2 597 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 CHMP2BQ9UQN3 213 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 CRYL1Q9Y2S2 319 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 FAM169AQ9Y6X4 670 aa12.37□□□□□ -0.43
LSM5-201ENST00000223084 ASPMQ8IZT6 3477 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 AHCTF1Q8WYP5 2266 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 SRRM3A6NNA2 597 aaPredicted RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 IFRD1O00458 451 aaPredicted RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 CAPN5O15484 640 aaPredicted RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 KIF1CO43896 1103 aaKnown RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 DXOO77932 396 aaKnown RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 S1PR4O95977 384 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 JMJD7P0C870 316 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 RPS3P23396 243 aaKnown RBP eCLIP12.36□□□□□ -0.43
LSM5-201ENST00000223084 AOAHP28039 575 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 ACADLP28330 430 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 RBMS1P29558 406 aaKnown RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 ELK3P41970 407 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 SLC1A2P43004 574 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 CD151P48509 253 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 MAPK10P53779 464 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 HSPA14Q0VDF9 509 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 PRKG2Q13237 762 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 EIF3IQ13347 325 aaKnown RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 TRA2AQ13595 282 aaKnown RBP eCLIP12.36□□□□□ -0.43
LSM5-201ENST00000223084 CRYMQ14894 314 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 HIF1AQ16665 826 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 TBC1D25Q3MII6 688 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 ZNF449Q6P9G9 518 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 ZNF572Q7Z3I7 529 aaPredicted RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 MAATS1Q7Z4T9 603 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 PDZD3Q86UT5 571 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.36□□□□□ -0.43
LSM5-201ENST00000223084 OR4E2Q8NGC2 313 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 TFGQ92734 400 aaPredicted RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 FAM136AQ96C01 138 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 CFAP36Q96G28 342 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 BIRC8Q96P09 236 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 CMKLR1Q99788 373 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 ERP44Q9BS26 406 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 EPB41L1Q9H4G0 881 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 KIR3DX1Q9H7L2 352 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms