RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ZBTB6Q15916 424 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 UBAP2Q5T6F2 1119 aaKnown RBP11.36□□□□□ -0.59
NOD1-201ENST00000222823 PRR23CQ6ZRP0 262 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 FAM220AQ7Z4H9 259 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 THAP5Q7Z6K1 395 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 IFNL1Q8IU54 200 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 SLC34A3Q8N130 599 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 OR10A6Q8NH74 314 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 PIH1D2Q8WWB5 315 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 SEZ6LQ9BYH1 1024 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 GULP1Q9UBP9 304 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 SSR3Q9UNL2 185 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 Q9Y3F1 56 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 ABLIM1O14639 778 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 SCELO95171 688 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 NADKO95544 446 aaPredicted RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 C8GP07360 202 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 ZNF24P17028 368 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 ITPKBP27987 946 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 RPS9P46781 194 aaKnown RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 OLR1P78380 273 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 SEMG2Q02383 582 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 LGALS3BPQ08380 585 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 INCA1Q0VD86 236 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 TRAP1Q12931 704 aaKnown RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 PRKD1Q15139 912 aaPredicted RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 MZT2BQ6NZ67 158 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 NEK5Q6P3R8 708 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 KRT77Q7Z794 578 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 RBM4BQ9BQ04 359 aaKnown RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 RBM4Q9BWF3 364 aaKnown RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 TRIT1Q9H3H1 467 aaKnown RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 TFB2MQ9H5Q4 396 aaKnown RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 ASB3Q9Y575 518 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 CXorf49A8MYA2 514 aaPredicted RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 E7ESA3 106 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 KERAO60938 352 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 UGT2B11O75310 529 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 F2P00734 622 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 SERPINA1P01009 418 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 THRBP10828 461 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 CYP4F8P98187 520 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 SLC18A2Q05940 514 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 ILF3Q12906 894 aaKnown RBP eCLIP11.35□□□□□ -0.59
NOD1-201ENST00000222823 FAM174BQ3ZCQ3 159 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 ARMC3Q5W041 872 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 NPLOC4Q8TAT6 608 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 ZNF599Q96NL3 588 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 POLR3BQ9NW08 1133 aaPredicted RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 MAP4K5Q9Y4K4 846 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 KLF11O14901 512 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 AHCYL1O43865 530 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 IFNW1P05000 195 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 UGT1A6P19224 532 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 UGT1A1P22309 533 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 UGT1A4P22310 534 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 UGT1A3P35503 534 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 UGT1A5P35504 534 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 RPS14P62263 151 aaKnown RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 ALG11Q2TAA5 492 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 GPR33Q49SQ1 333 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 LIX1Q8N485 282 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 GLB1L3Q8NCI6 653 aaPredicted RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 MCCC1Q96RQ3 725 aaPredicted RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 VRTNQ9H8Y1 702 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 FANCEQ9HB96 536 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 PCDHGB3Q9Y5G1 929 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 A0A1W2PRU2 124 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 ILVBLA1L0T0 632 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 HAT1O14929 419 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 NIPSNAP2O75323 286 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 EDNRBP24530 442 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 STAT5AP42229 794 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 C6orf52Q5T4I8 152 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 GCNT6Q5T4J0 391 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 TMEM198Q66K66 360 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 GDF6Q6KF10 455 aaPredicted RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 BRINP2Q9C0B6 783 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 CERS4Q9HA82 394 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 IFT80Q9P2H3 777 aaPredicted RBP11.35□□□□□ -0.59
NOD1-201ENST00000222823 PCDHGA4Q9Y5G9 962 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 COLEC10Q9Y6Z7 277 aa11.35□□□□□ -0.59
NOD1-201ENST00000222823 BHMG1C9JSJ3 638 aaPredicted RBP11.34□□□□□ -0.59
NOD1-201ENST00000222823 SLC31A1O15431 190 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 FFAR2O15552 330 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 PI15O43692 258 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 TNFRSF21O75509 655 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 LYNP07948 512 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 PEX2P28328 305 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 ERVK-21P61565 698 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 ZNF252P-AS1Q0IIN9 211 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 LAPTM5Q13571 262 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.34□□□□□ -0.59
NOD1-201ENST00000222823 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.34□□□□□ -0.59
NOD1-201ENST00000222823 FLCNQ8NFG4 579 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 FAM81AQ8TBF8 368 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 SH3RF2Q8TEC5 729 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 DENND1AQ8TEH3 1009 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 SLC13A3Q8WWT9 602 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 SLC9A6Q92581 669 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms