RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CRABP2P29373 138 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 RPA4Q13156 261 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 PPM1JQ5JR12 505 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 ASCL5Q7RTU5 278 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 EEF1AKMT1Q8WVE0 214 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 LINGO1Q96FE5 620 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 OR52A5Q9H2C5 316 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 DPEP2Q9H4A9 486 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 B4DGG1 531 aa26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 SLCO2B1O94956 709 aa26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 SLC35E2BP0CK96 405 aa26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 PLOD1Q02809 727 aaPredicted RBP26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 GBX1Q14549 363 aa26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 PIWIL4Q7Z3Z4 852 aaKnown RBP26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 SLC22A15Q8IZD6 547 aa26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 ANKRD49Q8WVL7 239 aa26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 ISL2Q96A47 359 aa26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 VPS11Q9H270 941 aa26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 RUVBL2Q9Y230 463 aaKnown RBP26.67■■□□□ 1.86
CHMP4B-201ENST00000217402 A0A096LPK6 155 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 A0A1W2PPM1 405 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 RFPL1O75677 317 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 C2P06681 752 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 IL2P60568 153 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 TAF1BQ53T94 588 aaPredicted RBP26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 PRR23CQ6ZRP0 262 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 KANSL1Q7Z3B3 1105 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 SFTPA2Q8IWL1 248 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 SPATA6LQ8N4H0 392 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 RMDN2Q96LZ7 410 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 SCHIP1Q9P0W5 487 aaPredicted RBP26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 TLK1Q9UKI8 766 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 CFAP20Q9Y6A4 193 aaKnown RBP26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 CSNK1G3Q9Y6M4 447 aa26.66■■□□□ 1.86
CHMP4B-201ENST00000217402 NEMP2A6NFY4 417 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 GOLGA8RI6L899 631 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 DYNC1I1O14576 645 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 RGS16O15492 202 aaPredicted RBP26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 SASH3O75995 380 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 WISP3O95389 354 aaPredicted RBP26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 MT-ND3P03897 115 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 BRAFP15056 766 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 TGM1P22735 817 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 MAGEA12P43365 314 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 RGS4P49798 205 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 IRF9Q00978 393 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 DNAJC3Q13217 504 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 AASDHQ4L235 1098 aaPredicted RBP26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 PDZD3Q86UT5 571 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 SDR16C5Q8N3Y7 309 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 UNKQ9C0B0 810 aaKnown RBP26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 VIPAS39Q9H9C1 493 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 SYTL2Q9HCH5 934 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 PCMTD2Q9NV79 361 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 SIRPGQ9P1W8 387 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 ZFC3H1O60293 1989 aaKnown RBP26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 TRBV23OR9-2A0A075B6M9 112 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 A6NCN8 305 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 CBSLP0DN79 551 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 F3P13726 295 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 CBSP35520 551 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 CSRP3P50461 194 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 ABRQ12979 859 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 CLCA4Q14CN2 919 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 UAP1L1Q3KQV9 507 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 TIFABQ6ZNK6 161 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 CROCCP2Q86T23 111 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 ZDHHC1Q8WTX9 485 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 PATE1Q8WXA2 126 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 ACOT9Q9Y305 439 aa26.65■■□□□ 1.86
CHMP4B-201ENST00000217402 OR52A4PA6NMU1 304 aa26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 IFRD1O00458 451 aaPredicted RBP26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 TSPAN12O95859 305 aa26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 MYZAPP0CAP1 466 aa26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 CCDC166P0CW27 439 aa26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 ENO3P13929 434 aaPredicted RBP26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 ATP5DP30049 168 aa26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 HALP42357 657 aa26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 AGAP9Q5VTM2 703 aa26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 TBC1D1Q86TI0 1168 aaPredicted RBP26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 NKAPQ8N5F7 415 aaKnown RBP26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 CFAP61Q8NHU2 1237 aa26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 C12orf66Q96MD2 445 aa26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 IMP3Q9NV31 184 aaKnown RBP26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 DNAAF2Q9NVR5 837 aaKnown RBP26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 PCOLCE2Q9UKZ9 415 aa26.64■■□□□ 1.85
CHMP4B-201ENST00000217402 A0A087X1B8 175 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 GOLGA6L10A6NI86 522 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 AGPSO00116 658 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 CDX4O14627 284 aaPredicted RBP26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 PCDHGA12O60330 932 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 MPOP05164 745 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 GIMD1P0DJR0 217 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 CSHL1Q14406 222 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 DUS1LQ6P1R4 473 aaKnown RBP26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 ABRAXAS1Q6UWZ7 409 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 WASH2PQ6VEQ5 465 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 CNPY4Q8N129 248 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 MYO1HQ8N1T3 1032 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 INSM2Q96T92 566 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms