RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 E9PBE3 544 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 KLHL41O60662 606 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 DNTTP04053 509 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 VCLP18206 1134 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 NAA20P61599 178 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 MRPS21P82921 87 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SMAD2Q15796 467 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 C18orf21Q32NC0 220 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TMEM220Q6QAJ8 160 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 MCUR1Q96AQ8 359 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FAR2Q96K12 515 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 OR2AG1Q9H205 316 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 MMADHCQ9H3L0 296 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 EPHX3Q9H6B9 360 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FAM8A1Q9UBU6 413 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SORCS3Q9UPU3 1222 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SLCO2B1O94956 709 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 CCINQ13939 588 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PCBP2Q15366 365 aaKnown RBP eCLIP19.29■□□□□ 0.687e-7■■■■□ 21.1
TNFRSF1A-201ENST00000162749 LSM12Q3MHD2 195 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ADGRG6Q86SQ4 1221 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 KIRREL3Q8IZU9 778 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 AFAP1L2Q8N4X5 818 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SKA2Q8WVK7 121 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 WDR60Q8WVS4 1066 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 MAELQ96JY0 434 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 LENG8Q96PV6 779 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ZCCHC2Q9C0B9 1178 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GULP1Q9UBP9 304 aa19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PTBP2Q9UKA9 531 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TRPC5OSA6NMA1 111 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 H0Y3Z8 333 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 S100BP04271 92 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FGF4P08620 206 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 RPSAP08865 295 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 AOC1P19801 751 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 CD72P21854 359 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FOXA1P55317 472 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 BTKQ06187 659 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 KPNB1Q14974 876 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 AGERQ15109 404 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TBCCQ15814 346 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 WSCD2Q2TBF2 565 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 UGT3A2Q3SY77 523 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ASB11Q8WXH4 323 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 RHBDF1Q96CC6 855 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 EGFL8Q99944 293 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TACO1Q9BSH4 297 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TRIM39Q9HCM9 518 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ATXN10Q9UBB4 475 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ZFR2Q9UPR6 939 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TNPO3Q9Y5L0 923 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 DNAH14Q0VDD8 3507 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SDHDO14521 159 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TAPBPO15533 448 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PLRG1O43660 514 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 LILRB5O75023 590 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 MPC1LP0DKB6 136 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GLULP15104 373 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PRDX3P30048 256 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PGM1P36871 562 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 METTL21CQ5VZV1 264 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PNCKQ6P2M8 343 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 MBOAT1Q6ZNC8 495 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 CLYBLQ8N0X4 340 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 LILRA3Q8N6C8 439 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 RPLP0P6Q8NHW5 317 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GANCQ8TET4 914 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 CDX2Q99626 313 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 CCM2Q9BSQ5 444 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 HGH1Q9BTY7 390 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 MEAF6Q9HAF1 191 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ZNF225Q9UK10 706 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PDE10AQ9Y233 779 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 DNAJC15Q9Y5T4 150 aa19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-201ENST00000162749 NCF2P19878 526 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 RPIAP49247 311 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 BCL7AQ4VC05 210 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ADAMTSL4Q6UY14 1074 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 NEK10Q6ZWH5 1172 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ACAD11Q709F0 780 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 UBE2R2Q712K3 238 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 Q7L0L9 218 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 HLA-CQ95604 372 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 COX14Q96I36 57 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 HIC2Q96JB3 615 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 KCNA7Q96RP8 456 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SLC12A9Q9BXP2 914 aa19.27■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GFYI3L273 518 aa19.27■□□□□ 0.67
TNFRSF1A-201ENST00000162749 AZIN1O14977 448 aa19.27■□□□□ 0.67
TNFRSF1A-201ENST00000162749 MLYCDO95822 493 aa19.27■□□□□ 0.67
TNFRSF1A-201ENST00000162749 PCCBP05166 539 aa19.27■□□□□ 0.67
TNFRSF1A-201ENST00000162749 C8GP07360 202 aa19.27■□□□□ 0.67
TNFRSF1A-201ENST00000162749 RAP1GDS1P52306 607 aa19.27■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ADPRHP54922 357 aa19.27■□□□□ 0.67
TNFRSF1A-201ENST00000162749 INHBCP55103 352 aa19.27■□□□□ 0.67
TNFRSF1A-201ENST00000162749 FGL2Q14314 439 aa19.27■□□□□ 0.67
TNFRSF1A-201ENST00000162749 ZNF658BQ4V348 819 aaPredicted RBP19.27■□□□□ 0.67
TNFRSF1A-201ENST00000162749 HEATR4Q86WZ0 1026 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms