RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ARL15Q9NXU5 204 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ACTR3BQ9P1U1 418 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 SLCO3A1Q9UIG8 710 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 CNOT11Q9UKZ1 510 aaKnown RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 CNOT6Q9ULM6 557 aaKnown RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 EIF3LQ9Y262 564 aaKnown RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 RWDD3Q9Y3V2 267 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 SNX13Q9Y5W8 968 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 AP4B1Q9Y6B7 739 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 MYOFQ9NZM1 2061 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 DHRS12A0PJE2 317 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 WASH3PC4AMC7 463 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 LSM1O15116 133 aaKnown RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 KPNA5O15131 536 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 TAPBPO15533 448 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 STK16O75716 305 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 NPPAP01160 153 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 HNRNPA1P09651 372 aaKnown RBP eCLIP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 HIST1H2AGP0C0S8 130 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 HIST1H2ADP20671 130 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 CYP2A7P20853 494 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ATP6V1B2P21281 511 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 SLC6A2P23975 617 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 BMPR1AP36894 532 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 FPGSQ05932 587 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 SP140Q13342 867 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 BOP1Q14137 746 aaKnown RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 CDKL4Q5MAI5 379 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 LY6G5CQ5SRR4 150 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ASTLQ6HA08 431 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 LCN8Q6JVE9 175 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 TTC23LQ6PF05 361 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 PSRC1Q6PGN9 363 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 CYP20A1Q6UW02 462 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 PRR23BQ6ZRT6 265 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 RNF165Q6ZSG1 346 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 Q6ZSR9 355 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 UBE2R2Q712K3 238 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 LRRC70Q7Z2Q7 622 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 TICAM1Q8IUC6 712 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 PLPP6Q8IY26 295 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 GALNT4Q8N4A0 578 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 MARVELD2Q8N4S9 558 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 TMEM102Q8N9M5 508 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ZNF784Q8NCA9 323 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 CHST14Q8NCH0 376 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 DNAJB14Q8TBM8 379 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 LRCH3Q96II8 777 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 HIST1H2AHQ96KK5 128 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 HIST1H2AJQ99878 128 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 HEPHQ9BQS7 1158 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 CENPKQ9BS16 269 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 H2AFJQ9BTM1 129 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 SLC29A3Q9BZD2 475 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ABCG8Q9H221 673 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 RAD18Q9NS91 495 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 CMTM6Q9NX76 183 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 PCDH10Q9P2E7 1040 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 KLQ9UEF7 1012 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 AURKCQ9UQB9 309 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ERVW-1Q9UQF0 538 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 IGLV3-16A0A075B6K0 115 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 UPK3BL1B0FP48 263 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 UPK3BL2E5RIL1 263 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 QSOX1O00391 747 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 FFAR3O14843 346 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ARPC2O15144 300 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 GPR42O15529 346 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 DENRO43583 198 aaKnown RBP8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ULK1O75385 1050 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 KRT6AP02538 564 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 KRT6BP04259 564 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 LINGO3P0C6S8 592 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 G6PDP11413 515 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 IL10P22301 178 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 KRT6CP48668 564 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 RPIAP49247 311 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 EEFSECP57772 596 aaKnown RBP8.1□□□□□ -1.11
VAMP3-201ENST00000054666 DCDC1P59894 354 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 UBE3AQ05086 875 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 HSPA14Q0VDF9 509 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ABRAXAS2Q15018 415 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 SLC5A9Q2M3M2 681 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 SMU1Q2TAY7 513 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ZNF284Q2VY69 593 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 MTX3Q5HYI7 312 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 TBCELQ5QJ74 424 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 CACHD1Q5VU97 1274 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 OR52E8Q6IFG1 317 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 FBXL19Q6PCT2 694 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 DET1Q7L5Y6 550 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ADIPOR2Q86V24 386 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 OR2A12Q8NGT7 310 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 PROKR1Q8TCW9 393 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 SP7Q8TDD2 431 aaPredicted RBP8.1□□□□□ -1.11
VAMP3-201ENST00000054666 LRTOMTQ8WZ04 291 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 TMEM125Q96AQ2 219 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 SLC45A3Q96JT2 553 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 TEX37Q96LM6 180 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 TRAPPC9Q96Q05 1148 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms