RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 DET1Q7L5Y6 550 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 MIER2Q8N344 545 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 SUSD6Q92537 303 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 JADE3Q92613 823 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 CHFRQ96EP1 664 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 IPPKQ9H8X2 491 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 WDR41Q9HAD4 459 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 TRPS1Q9UHF7 1281 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 TSR3Q9UJK0 312 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 HCN2Q9UL51 889 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 ITM2BQ9Y287 266 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 BTRCQ9Y297 605 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 GPR45Q9Y5Y3 372 aa14.04□□□□□ -0.16
RTFDC1-201ENST00000023939 PIKFYVEQ9Y2I7 2098 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 C1QTNF3-AMACRE9PGA6 284 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 FKBP6O75344 327 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 STK16O75716 305 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 KRT36O76013 467 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 WDR47O94967 919 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 GUCA1CO95843 209 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 LAMP2P13473 410 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 IL12RB1P42701 662 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 MAPK9P45984 424 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 RPIAP49247 311 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 PRLHRP49683 370 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 METAP1P53582 386 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 AP1S2P56377 157 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 HSPA14Q0VDF9 509 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 LRP8Q14114 963 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 E2F5Q15329 346 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 FAM219BQ5XKK7 198 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 UBE2R2Q712K3 238 aaPredicted RBP14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 ERN2Q76MJ5 926 aaKnown RBP14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 MILR1Q7Z6M3 343 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 FUNDC1Q8IVP5 155 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 SFTPA1Q8IWL2 248 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 CDYL2Q8N8U2 506 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 RASGEF1AQ8N9B8 481 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 OR4F6Q8NGB9 312 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 ANKRD27Q96NW4 1050 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 PRSS16Q9NQE7 514 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 AIG1Q9NVV5 245 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 CACNA2D2Q9NY47 1150 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 STOML1Q9UBI4 398 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 CNOT6Q9ULM6 557 aaKnown RBP14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 POMPQ9Y244 141 aa14.03□□□□□ -0.16
RTFDC1-201ENST00000023939 ARNTLO00327 626 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 FBP2O00757 339 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 NPC1O15118 1278 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 NRP2O60462 931 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 MTX2O75431 263 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 KATNA1O75449 491 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 SOD1P00441 154 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 CAPN1P07384 714 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 EBLN1P0CF75 366 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 ERVK-8P63133 956 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 GRM2Q14416 872 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 RCN1Q15293 331 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 SMU1Q2TAY7 513 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 ITPRIPL2Q3MIP1 535 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 BCL7AQ4VC05 210 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 PIGGQ5H8A4 983 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 COQ5Q5HYK3 327 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 FAM46CQ5VWP2 391 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 NAIF1Q69YI7 327 aaPredicted RBP14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 REP15Q6BDI9 236 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 CES5AQ6NT32 575 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 C8orf82Q6P1X6 216 aaPredicted RBP14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 NUDT18Q6ZVK8 323 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 LRRC70Q7Z2Q7 622 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 VRK3Q8IV63 474 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 METTL6Q8TCB7 284 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 ELMO1Q92556 727 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 GLMNQ92990 594 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 ACOX2Q99424 681 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 SLC29A3Q9BZD2 475 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 BRINP2Q9C0B6 783 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 SLC32A1Q9H598 525 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 DYRK4Q9NR20 520 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 ARL15Q9NXU5 204 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 CCDC167Q9P0B6 97 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 CLEC1BQ9P126 229 aa14.02□□□□□ -0.16
RTFDC1-201ENST00000023939 DOCK8Q8NF50 2099 aa14.02□□□□□ -0.17
RTFDC1-201ENST00000023939 CHD7Q9P2D1 2997 aa14.02□□□□□ -0.17
RTFDC1-201ENST00000023939 CHD9Q3L8U1 2897 aa14.02□□□□□ -0.17
RTFDC1-201ENST00000023939 ATG13O75143 517 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 PDE5AO76074 875 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 RECQL5O94762 991 aaPredicted RBP14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 ANP32DO95626 131 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 APODP05090 189 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 GSTM1P09488 218 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 HIST1H2AGP0C0S8 130 aaPredicted RBP14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 EPB42P16452 691 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 HIST1H2ADP20671 130 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 CYP2A7P20853 494 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 SLC6A12P48065 614 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 GSTM4Q03013 218 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 SLC34A1Q06495 639 aa14.01□□□□□ -0.17
RTFDC1-201ENST00000023939 TMEM115Q12893 351 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms