RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm6502L7N456 481 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Psma3O70435 255 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Prf1P10820 554 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Lhx3P50481 400 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Kcnab2P62482 367 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Armc7Q3UJZ3 198 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 SynaQ5G5D5 617 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Brsk1Q5RJI5 778 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Ltbp3Q61810 1268 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 VwdeQ6DFV8 926 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Mon1aQ6PDG8 556 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Rxfp4Q7TQP4 414 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 AftphQ80WT5 931 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Q8CDN1 933 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 GhdcQ99J23 532 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Lactb2Q99KR3 288 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Ribc2Q9D4Q1 309 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Gbe1Q9D6Y9 702 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 TrmuQ9DAT5 417 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 ScelQ9EQG3 652 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 B9d1Q9R1S0 204 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Gm13040A2A8C4 496 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 1700001O22RikA2APZ1 375 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Gm13101A2ASJ0 481 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Gm13119B1ARV5 481 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Cilp2D3Z7H8 1162 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Vmn2r73D3Z7M3 851 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Nsmce4aG3XA30 381 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Vmn2r31L7N1Z4 861 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 PigfO09101 219 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Nrp2O35375 931 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Bnc1O35914 961 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 AhcyP50247 432 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Eif2ak2Q03963 515 aaKnown RBP11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Hephl1Q3V1H3 1159 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Phf12Q5SPL2 1003 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Itih2Q61703 946 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Ppp1r14bQ62084 147 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Fam72aQ8BFZ8 149 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Smoc1Q8BLY1 463 aaKnown RBP11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Plekha4Q8VC98 588 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Nle1Q8VEJ4 485 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 B3galt6Q91Z92 325 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 HnrnpllQ921F4 591 aaKnown RBP11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Atp13a2Q9CTG6 1169 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Cnbd2Q9D5U8 673 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 GatmQ9D964 423 aaKnown RBP11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Rdh11Q9QYF1 316 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Spin2gA0A0N4SW15 236 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Gm4869A0A1B0GSG7 984 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Faap100A2ACJ2 879 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Gm6569D3YTM9 175 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Vmn2r125D3Z3M1 369 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Zfp788E9Q980 884 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Gm4847G3X946 537 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Arfip1G5E8V9 373 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Spin2eJ3QNQ0 234 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr237-ps1K9J725 310 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 St3gal5O88829 414 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 GfapP03995 430 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Enpp1P06802 906 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ifrd1P19182 449 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Gadd45aP48316 165 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Gabrr2P56476 465 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Rps24P62849 133 aaKnown RBP11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Il11ra2P70225 432 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Dusp2Q05922 318 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Pfdn4Q3UWL8 134 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Zbtb2Q3V3W4 514 aaKnown RBP11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Cpa6Q5U901 438 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 DglucyQ8BH86 617 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ikzf5Q8BU00 419 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Prdm8Q8BZ97 687 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 GaleQ8R059 347 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Atg10Q8R1P4 215 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr1250Q8VGM3 314 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Art4Q9CRA0 300 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Nos1apQ9D3A8 503 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 VapaQ9WV55 249 aaKnown RBP11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 DnpepQ9Z2W0 473 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Tmem131O70472 1877 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Adh6bA0A1D5RMB0 384 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Smim17A0A504 109 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Cyp4a14O35728 507 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 P01664 111 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Esr1P19785 599 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Cyp2c37P56654 490 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Rps17P63276 135 aaKnown RBP11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Zfp39Q02525 718 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Mdga1Q0PMG2 940 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Glb1l2Q3UPY5 636 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 SctrQ5FWI2 447 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Lcp2Q60787 533 aaKnown RBP11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Slc23a3Q60850 611 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Mvb12bQ6KAU4 317 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Q6P2K3 674 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Znf280cQ6P3Y5 742 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Spata7Q80VP2 582 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Zbtb24Q80X44 710 aa11.39□□□□□ -0.59
Col9a1-202ENSMUST00000088349 C2cd4bQ80XU5 340 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms