RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	ACTRT1	Q8TDG2	376 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	COG1	Q8WTW3	980 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	RSC1A1	Q92681	617 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	ART4	Q93070	314 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	C12orf66	Q96MD2	445 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	TAAR9	Q96RI9	348 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	TTC1	Q99614	292 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	IL22	Q9GZX6	179 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	PRORY	Q9H606	182 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	COG4	Q9H9E3	785 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	OCIAD1	Q9NX40	245 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	BFAR	Q9NZS9	450 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	CFAP20	Q9Y6A4	193 aa	Known RBP	14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	QSOX1	O00391	747 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	CES2	O00748	559 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	CAPN5	O15484	640 aa	Predicted RBP	14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	KRT14	P02533	472 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	ANKRD34C	P0C6C1	535 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	CD82	P27701	267 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	COIL	P38432	576 aa	Predicted RBP	14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	VPS41	P49754	854 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	TMPRSS3	P57727	454 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	GPS1	Q13098	491 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	GSE1	Q14687	1217 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	PLCL1	Q15111	1095 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	KCTD19	Q17RG1	926 aa	Predicted RBP	14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	LYPLAL1	Q5VWZ2	237 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	CAPRIN2	Q6IMN6	1127 aa	Known RBP	14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	LRRC8B	Q6P9F7	803 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	SPDYE1	Q8NFV5	336 aa	Predicted RBP	14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	OR4L1	Q8NH43	312 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	ZFPM2	Q8WW38	1151 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	ZDHHC12	Q96GR4	267 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	SGSM3	Q96HU1	749 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	C9orf72	Q96LT7	481 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	RMDN2	Q96LZ7	410 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	TGM7	Q96PF1	710 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	DDA1	Q9BW61	102 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	CHRAC1	Q9NRG0	131 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	SLC39A1	Q9NY26	324 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	EPHA6	Q9UF33	1036 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	SNX12	Q9UMY4	172 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	SSUH2	Q9Y2M2	353 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	PCDHGA3	Q9Y5H0	932 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	HEBP2	Q9Y5Z4	205 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	PRSS21	Q9Y6M0	314 aa		14.69	□□□□□ -0.06
PHGDH-231	ENST00000641939	TCRBV7S3A2	A0A539	114 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	USP27X	A6NNY8	438 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	TOX3	O15405	576 aa	Predicted RBP	14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	LIPC	P11150	499 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	MAGEA6	P43360	314 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	RAB15	P59190	212 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	CRADD	P78560	199 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	SARNP	P82979	210 aa	Known RBP	14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	MC2R	Q01718	297 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	RPA4	Q13156	261 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	KRT33B	Q14525	404 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	KCNJ11	Q14654	390 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	ZNF658B	Q4V348	819 aa	Predicted RBP	14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	FASTKD1	Q53R41	847 aa	Known RBP	14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	DCAF12	Q5T6F0	453 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	DUS1L	Q6P1R4	473 aa	Known RBP	14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	ZNF449	Q6P9G9	518 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	KLHL35	Q6PF15	583 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	CCDC137	Q6PK04	289 aa	Known RBP	14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	CERS6	Q6ZMG9	384 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	ZNF534	Q76KX8	674 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	BMPER	Q8N8U9	685 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	PMEPA1	Q969W9	287 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	FCRL3	Q96P31	734 aa	Predicted RBP	14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	ASPSCR1	Q9BZE9	553 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	RAB33B	Q9H082	229 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	OR52A5	Q9H2C5	316 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	KIR3DX1	Q9H7L2	352 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	COLEC10	Q9Y6Z7	277 aa		14.68	□□□□□ -0.06
PHGDH-231	ENST00000641939	GOLGA6L10	A0A0M3HER8	536 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	IFRD1	O00458	451 aa	Predicted RBP	14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	OR1I1	O60431	355 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	PHF2	O75151	1096 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	RASSF9	O75901	435 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	FTH1	P02794	183 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	MGAT1	P26572	445 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	NDUFS1	P28331	727 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	PPARG	P37231	505 aa	Predicted RBP	14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	LEPR	P48357	1165 aa	Known RBP	14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	CD151	P48509	253 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	TERF1	P54274	439 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	CXADR	P78310	365 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	TGIF1	Q15583	401 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	IRGC	Q6NXR0	463 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	ZFAND4	Q86XD8	727 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	JPH3	Q8WXH2	748 aa	Predicted RBP	14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	TEFM	Q96QE5	360 aa	Known RBP	14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	MRM3	Q9HC36	420 aa	Known RBP	14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	CPNE5	Q9HCH3	593 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	TREX1	Q9NSU2	369 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	CATSPERZ	Q9NTU4	200 aa		14.67	□□□□□ -0.06
PHGDH-231	ENST00000641939	WDR70	Q9NW82	654 aa		14.67	□□□□□ -0.06

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