RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 MAVSQ7Z434 540 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 ALYREFQ86V81 257 aaKnown RBP9.55□□□□□ -0.88
PHGDH-215ENST00000641371 TMPRSS6Q8IU80 811 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 HDDC3Q8N4P3 179 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 DENND6BQ8NEG7 585 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 HM13Q8TCT9 377 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 AGAP11Q8TF27 550 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 ASB11Q8WXH4 323 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 FAM136AQ96C01 138 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 C19orf60Q96EN9 201 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 HIC2Q96JB3 615 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 EBF4Q9BQW3 602 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 BTBD10Q9BSF8 475 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 HGH1Q9BTY7 390 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 WRAP53Q9BUR4 548 aaKnown RBP9.55□□□□□ -0.88
PHGDH-215ENST00000641371 NUF2Q9BZD4 464 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 UNKQ9C0B0 810 aaKnown RBP9.55□□□□□ -0.88
PHGDH-215ENST00000641371 TTYH1Q9H313 450 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-215ENST00000641371 DPEP2Q9H4A9 486 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 MTG2Q9H4K7 406 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 UBE2ZQ9H832 354 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-215ENST00000641371 MID1IP1Q9NPA3 183 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 SLC2A4RGQ9NR83 387 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 GALPQ9UBC7 116 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 OPTCQ9UBM4 332 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 CD84Q9UIB8 345 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 PCTPQ9UKL6 214 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 ANGPTL3Q9Y5C1 460 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 PIAS3Q9Y6X2 628 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 TRPM6Q9BX84 2022 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 GFYI3L273 518 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 E2F3O00716 465 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 TOR1BO14657 336 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 MID1O15344 667 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 PLRG1O43660 514 aaKnown RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 MMP20O60882 483 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 STK16O75716 305 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 RPN2P04844 631 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 GM2AP17900 193 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 ITGB6P18564 788 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 NCF2P19878 526 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 DRD3P35462 400 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 TIE1P35590 1138 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 RPIAP49247 311 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 MRPL19P49406 292 aaKnown RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 COPAP53621 1224 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 PNLIPRP1P54315 467 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 STX1BP61266 288 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 RPS14P62263 151 aaKnown RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 HSPA14Q0VDF9 509 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 ADGRE1Q14246 886 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 PDCD2Q16342 344 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 RBBP7Q16576 425 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 GSTA3Q16772 222 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 POM121L1PQ3SYA9 428 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 C10orf62Q5T681 223 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 NXNQ6DKJ4 435 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 GPR153Q6NV75 609 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 RFLNAQ6ZTI6 216 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 CHSY3Q70JA7 882 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 UBE2R2Q712K3 238 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 SPATA19Q7Z5L4 167 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 RASGRP3Q8IV61 690 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 KLHDC8AQ8IYD2 350 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 SYNPOQ8N3V7 929 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 SLC44A3Q8N4M1 653 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 PNPLA1Q8N8W4 532 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 RP9Q8TA86 221 aaKnown RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 LKAAEAR1Q8TD35 194 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 RHBDF1Q96CC6 855 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 PTCD3Q96EY7 689 aaKnown RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 COX14Q96I36 57 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 RPP25Q9BUL9 199 aaKnown RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 NTMT1Q9BV86 223 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 SLC29A3Q9BZD2 475 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 CD244Q9BZW8 370 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 SLC32A1Q9H598 525 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 KCNK12Q9HB15 430 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 PHPT1Q9NRX4 125 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 ARL15Q9NXU5 204 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 TRPS1Q9UHF7 1281 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 HCN2Q9UL51 889 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 TMPRSS11EQ9UL52 423 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 MTF2Q9Y483 593 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-215ENST00000641371 ANKRD12Q6UB98 2062 aa9.54□□□□□ -0.88
PHGDH-215ENST00000641371 BRWD1Q9NSI6 2320 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 SLC5A10A0PJK1 596 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 GRXCR2A6NFK2 248 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 ZNF839A8K0R7 811 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 C2CD4DB7Z1M9 353 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 SDHDO14521 159 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 GYG2O15488 501 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 UGDHO60701 494 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 PSIP1O75475 530 aaKnown RBP9.53□□□□□ -0.88
PHGDH-215ENST00000641371 RNASEH2AO75792 299 aaKnown RBP9.53□□□□□ -0.88
PHGDH-215ENST00000641371 PCDH8O95206 1070 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 SIX3O95343 332 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-215ENST00000641371 MATN4O95460 622 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 HOXC4P09017 264 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 273.4 ms