RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 KCNA10Q16322 511 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 PSMD5Q16401 504 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 PKDCCQ504Y2 493 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 TEX30Q5JUR7 227 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 KRBOX4Q5JUW0 171 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 WSCD1Q658N2 575 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 FAM109BQ6ICB4 259 aaPredicted RBP7.87□□□□□ -1.15
RTTN-223ENST00000640931 SCYL2Q6P3W7 929 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 FUT10Q6P4F1 479 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 TTC33Q6PID6 262 aaPredicted RBP7.87□□□□□ -1.15
RTTN-223ENST00000640931 LCLAT1Q6UWP7 414 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 PRPF39Q86UA1 669 aaKnown RBP7.87□□□□□ -1.15
RTTN-223ENST00000640931 C12orf40Q86WS4 652 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 UBQLNLQ8IYU4 475 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 PCSK9Q8NBP7 692 aaKnown RBP7.87□□□□□ -1.15
RTTN-223ENST00000640931 BEST2Q8NFU1 509 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 IPMKQ8NFU5 416 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 SLC13A3Q8WWT9 602 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 ASB12Q8WXK4 309 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 GTF3AQ92664 365 aaKnown RBP7.87□□□□□ -1.15
RTTN-223ENST00000640931 RNF166Q96A37 237 aaPredicted RBP7.87□□□□□ -1.15
RTTN-223ENST00000640931 ZHX1-C8orf76Q96EF9 292 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 MAGEB10Q96LZ2 347 aaPredicted RBP7.87□□□□□ -1.15
RTTN-223ENST00000640931 TBATAQ96M53 351 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 C19orf43Q9BQ61 176 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 BCL7BQ9BQE9 202 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 NAA50Q9GZZ1 169 aaKnown RBP7.87□□□□□ -1.15
RTTN-223ENST00000640931 RACGAP1Q9H0H5 632 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 MANSC1Q9H8J5 431 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 CYP3A43Q9HB55 503 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 ANKHQ9HCJ1 492 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 PRDM9Q9NQV7 894 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 TLR6Q9Y2C9 796 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 DMRT1Q9Y5R6 373 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 PSAT1Q9Y617 370 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 HSPE1-MOB4S4R3N1 261 aa7.87□□□□□ -1.15
RTTN-223ENST00000640931 ZNF236Q9UL36 1845 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 TCRBV7S3A2A0A539 114 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 FAM92AA1XBS5 289 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 KPNA7A9QM74 516 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 F5H423 210 aaPredicted RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 LOC110117498-PIK3R3F6TDL0 507 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 POC1B-GALNT4F8VUJ3 575 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 CACNB4O00305 520 aaPredicted RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 MED7O43513 233 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 CA12O43570 354 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 LIASO43766 372 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 TYROBPO43914 113 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 SYNCRIPO60506 623 aaKnown RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 SEC14L2O76054 403 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 GUCA1CO95843 209 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 TRUB2O95900 331 aaKnown RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 RB1P06400 928 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 MYL2P10916 166 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 PDGFRAP16234 1089 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 HK1P19367 917 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 KLRC2P26717 231 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 RPA3P35244 121 aaPredicted RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 IL12RB1P42701 662 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 RPL35P42766 123 aaKnown RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 GBX2P52951 348 aaPredicted RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 CRYBB1P53674 252 aaPredicted RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 EPHB1P54762 984 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 MRPS6P82932 125 aaKnown RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 CDH17Q12864 832 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 OVGP1Q12889 678 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 KCNJ11Q14654 390 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 MAPKAPK3Q16644 382 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 INO80DQ53TQ3 878 aaPredicted RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 PITRM1Q5JRX3 1037 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 DESI1Q6ICB0 168 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 CFAP161Q6P656 301 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 RHBDF2Q6PJF5 856 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 RETREG3Q86VR2 466 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 ADGRG3Q86Y34 549 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 RFX6Q8HWS3 928 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 POC5Q8NA72 575 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 TDRD5Q8NAT2 981 aaKnown RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 ZNF540Q8NDQ6 660 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 BLOC1S5Q8TDH9 187 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 ATOH1Q92858 354 aaPredicted RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 SGTBQ96EQ0 304 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 MAGED4Q96JG8 741 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 BTN2A3PQ96KV6 586 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 MTG1Q9BT17 334 aaPredicted RBP7.86□□□□□ -1.15
RTTN-223ENST00000640931 TM9SF3Q9HD45 589 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 TMEM30AQ9NV96 361 aa7.86□□□□□ -1.15
RTTN-223ENST00000640931 A0A0G2JPF8 293 aa7.85□□□□□ -1.15
RTTN-223ENST00000640931 PRSS51A0A1B0GVH4 220 aa7.85□□□□□ -1.15
RTTN-223ENST00000640931 SLC12A8A0AV02 714 aa7.85□□□□□ -1.15
RTTN-223ENST00000640931 C2CD4BA6NLJ0 364 aa7.85□□□□□ -1.15
RTTN-223ENST00000640931 HNRNPCL3B7ZW38 293 aa7.85□□□□□ -1.15
RTTN-223ENST00000640931 TRIM38O00635 465 aa7.85□□□□□ -1.15
RTTN-223ENST00000640931 FZD6O60353 706 aa7.85□□□□□ -1.15
RTTN-223ENST00000640931 CST8O60676 142 aa7.85□□□□□ -1.15
RTTN-223ENST00000640931 EIF1BO60739 113 aaKnown RBP7.85□□□□□ -1.15
RTTN-223ENST00000640931 DUSP11O75319 330 aaKnown RBP7.85□□□□□ -1.15
RTTN-223ENST00000640931 POMCP01189 267 aa7.85□□□□□ -1.15
RTTN-223ENST00000640931 IFNB1P01574 187 aa7.85□□□□□ -1.15
RTTN-223ENST00000640931 AMHP03971 560 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms