RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CLPPQ16740 277 aaPredicted RBP26.09■■□□□ 1.77
VEGFA-231ENST00000640499 DUPD1Q68J44 220 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 PIM3Q86V86 326 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 TRIM48Q8IWZ4 208 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 KRT222Q8N1A0 295 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 KDF1Q8NAX2 398 aaPredicted RBP26.09■■□□□ 1.77
VEGFA-231ENST00000640499 AVL9Q8NBF6 648 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 LPGAT1Q92604 370 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 GRAMD1AQ96CP6 724 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 TRIM44Q96DX7 344 aaPredicted RBP26.09■■□□□ 1.77
VEGFA-231ENST00000640499 C12orf66Q96MD2 445 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 BIRC8Q96P09 236 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.09■■□□□ 1.77
VEGFA-231ENST00000640499 STN1Q9H668 368 aaKnown RBP26.09■■□□□ 1.77
VEGFA-231ENST00000640499 IMP3Q9NV31 184 aaKnown RBP26.09■■□□□ 1.77
VEGFA-231ENST00000640499 DMXL2Q8TDJ6 3036 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 IGHV5-10-1A0A0J9YXX1 117 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 BHMG1C9JSJ3 638 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-231ENST00000640499 PRMT5O14744 637 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-231ENST00000640499 FTH1P02794 183 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 MPOP05164 745 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 GSTM1P09488 218 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 OR56A5P0C7T3 313 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 ITGB6P18564 788 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 MPSTP25325 297 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 GSTM4Q03013 218 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 TRADDQ15628 312 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 BBS9Q3SYG4 887 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 MAP9Q49MG5 647 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 CTSL3PQ5NE16 218 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 HP1BP3Q5SSJ5 553 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-231ENST00000640499 CILP2Q8IUL8 1156 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 JPH3Q8WXH2 748 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-231ENST00000640499 ELMO1Q92556 727 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 VPS37BQ9H9H4 285 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 GRHL1Q9NZI5 618 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 PDP2Q9P2J9 529 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 SATB2Q9UPW6 733 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 CDYLQ9Y232 598 aa26.08■■□□□ 1.77
VEGFA-231ENST00000640499 S1PR4O95977 384 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 SLC35G4P0C7Q5 338 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 PGAM1P18669 254 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 PAMP19021 973 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 RPS3P23396 243 aaKnown RBP eCLIP26.07■■□□□ 1.761e-7■■□□□ 12.2
VEGFA-231ENST00000640499 LIMK2P53671 638 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 RPA4Q13156 261 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 CBLBQ13191 982 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 BRD3Q15059 726 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 MRNIPQ6NTE8 343 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 MAATS1Q7Z4T9 603 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 DENND6AQ8IWF6 608 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 OR4D9Q8NGE8 314 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 OR10G6Q8NH81 332 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 LIN37Q96GY3 246 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-231ENST00000640499 TMEM74Q96NL1 305 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 CARD6Q9BX69 1037 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 DPH5Q9H2P9 285 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 DKK4Q9UBT3 224 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 MRFAP1Q9Y605 127 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 TEX264Q9Y6I9 313 aa26.07■■□□□ 1.76
VEGFA-231ENST00000640499 SMAPO00193 183 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 QSOX1O00391 747 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 NDUFS3O75489 264 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 TYRP1P17643 537 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 OGNP20774 298 aaKnown RBP26.06■■□□□ 1.76
VEGFA-231ENST00000640499 ACADLP28330 430 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 PPARGP37231 505 aaPredicted RBP26.06■■□□□ 1.76
VEGFA-231ENST00000640499 ELK3P41970 407 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 CRYMQ14894 314 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 C16orf72Q14CZ0 275 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 LONRF1Q17RB8 773 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 WHAMMP3Q1A5X7 153 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 DNAJC21Q5F1R6 531 aaKnown RBP26.06■■□□□ 1.76
VEGFA-231ENST00000640499 TMEM71Q6P5X7 295 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 WDR74Q6RFH5 385 aaPredicted RBP26.06■■□□□ 1.76
VEGFA-231ENST00000640499 VRK3Q8IV63 474 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 RBM12BQ8IXT5 1001 aaKnown RBP26.06■■□□□ 1.76
VEGFA-231ENST00000640499 TCF12Q99081 682 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 NRTNQ99748 197 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 EPB41L5Q9HCM4 733 aa26.06■■□□□ 1.76
VEGFA-231ENST00000640499 AGRPO00253 132 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 LIN7AO14910 233 aaPredicted RBP26.05■■□□□ 1.76
VEGFA-231ENST00000640499 ZW10O43264 779 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 GPC4O75487 556 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 TUBB4AP04350 444 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 THRAP10827 490 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 MAPK9P45984 424 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 LSSP48449 732 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 CKAP4Q07065 602 aaKnown RBP26.05■■□□□ 1.76
VEGFA-231ENST00000640499 CTBP1Q13363 440 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 C3orf38Q5JPI3 329 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 SDCCAG8Q86SQ7 713 aaPredicted RBP26.05■■□□□ 1.76
VEGFA-231ENST00000640499 SPNS2Q8IVW8 549 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 OTUD6BQ8N6M0 293 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.05■■□□□ 1.766e-6■■■■■ 47.7
VEGFA-231ENST00000640499 RCBTB1Q8NDN9 531 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 PHC3Q8NDX5 983 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 NCSTNQ92542 709 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 NXPE2Q96DL1 559 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 CCDC74BQ96LY2 380 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms