RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 DCP1BQ8IZD4 617 aaKnown RBP5.62□□□□□ -1.51
SCARB2-217ENST00000639324 DNASE1L2Q92874 299 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 SMARCD2Q92925 531 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 EXOC4Q96A65 974 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 MSANTD3Q96H12 275 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 PPM1MQ96MI6 270 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 ZNF396Q96N95 335 aaPredicted RBP5.62□□□□□ -1.51
SCARB2-217ENST00000639324 NPAS1Q99742 590 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 HDHD5Q9BXW7 423 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 CCSER1Q9C0I3 900 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 ZSCAN16Q9H4T2 348 aaPredicted RBP5.62□□□□□ -1.51
SCARB2-217ENST00000639324 STN1Q9H668 368 aaKnown RBP5.62□□□□□ -1.51
SCARB2-217ENST00000639324 TMEM206Q9H813 350 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 LTB4R2Q9NPC1 389 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 ARL15Q9NXU5 204 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 KLQ9UEF7 1012 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 GMEB2Q9UKD1 530 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 RAB23Q9ULC3 237 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 NDRG2Q9UN36 371 aaKnown RBP5.62□□□□□ -1.51
SCARB2-217ENST00000639324 C2CD2Q9Y426 696 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 ASB3Q9Y575 518 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 CLIC4Q9Y696 253 aa5.62□□□□□ -1.51
SCARB2-217ENST00000639324 A0A1B0GVC2 190 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 DPPA5A6NC42 116 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 A6NLC8 198 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 C16orf96A6NNT2 1141 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 CYB561D2O14569 222 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 HUS1O60921 280 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 OAZ2O95190 189 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 METTL18O95568 372 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 NFATC1O95644 943 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 TOP3BO95985 862 aaKnown RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 LYL1P12980 280 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 HOXB9P17482 250 aaPredicted RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 PSMC3P17980 439 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 CDC25CP30307 473 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 IDUAP35475 653 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 AVPR1AP37288 418 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 ACOT2P49753 483 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 CCR5P51681 352 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 SLC12A2P55011 1212 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 STARD6P59095 220 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 YPEL5P62699 121 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 GTF2BQ00403 316 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 MYL7Q01449 175 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 POU5F1Q01860 360 aaKnown RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 CSTF1Q05048 431 aaKnown RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 SMARCB1Q12824 385 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 BFSP1Q12934 665 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 GPR17Q13304 367 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 GALNT3Q14435 633 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 TEAD2Q15562 447 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 GPR68Q15743 365 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 ZNF528Q3MIS6 628 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 SLC39A12Q504Y0 691 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 FAM78AQ5JUQ0 283 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 INTS11Q5TA45 600 aaKnown RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 SPATA1Q5VX52 437 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 C9orf57Q5W0N0 161 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 SLC18B1Q6NT16 456 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 RBM44Q6ZP01 1051 aaKnown RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 RFX6Q8HWS3 928 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 C2orf15Q8WU43 125 aaKnown RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 FAM3CQ92520 227 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 HTRA1Q92743 480 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 EPSTI1Q96J88 318 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 MPP4Q96JB8 637 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 SENP8Q96LD8 212 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 CD180Q99467 661 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 FAM213AQ9BRX8 229 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 RPP25Q9BUL9 199 aaKnown RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 PLXNA4Q9HCM2 1894 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 HEBP1Q9NRV9 189 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 BLOC1S4Q9NUP1 217 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 IRAK4Q9NWZ3 460 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 DPP3Q9NY33 737 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 RBAKQ9NYW8 714 aaPredicted RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 TBC1D7Q9P0N9 293 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 CPSF3Q9UKF6 684 aaKnown RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 SRPRBQ9Y5M8 271 aaKnown RBP5.61□□□□□ -1.51
SCARB2-217ENST00000639324 PIAS3Q9Y6X2 628 aa5.61□□□□□ -1.51
SCARB2-217ENST00000639324 FNDC1Q4ZHG4 1894 aaPredicted RBP5.6□□□□□ -1.51
SCARB2-217ENST00000639324 KIAA1671Q9BY89 1806 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 MTMR11A4FU01 709 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 NPIPB13A6NJU9 1138 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 NPIPB5A8MRT5 1133 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 HEPACAM2A8MVW5 462 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 KPNA7A9QM74 516 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 NPIPB4C9JG80 1138 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 PPP6CO00743 305 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 RRHO14718 337 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 IKBKBO14920 756 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 MSI1O43347 362 aaKnown RBP5.6□□□□□ -1.51
SCARB2-217ENST00000639324 STX6O43752 255 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 SEC24AO95486 1093 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 PLAUP00749 431 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 TNNC2P02585 160 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 GJA1P17302 382 aa5.6□□□□□ -1.51
SCARB2-217ENST00000639324 TRIM21P19474 475 aaKnown RBP5.6□□□□□ -1.51
SCARB2-217ENST00000639324 TFEBP19484 476 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms