RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 SRCP12931 536 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 HTR1EP28566 365 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 CD70P32970 193 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 GSK3BP49841 420 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 POLR2LP62875 67 aaKnown RBP11.93□□□□□ -0.5
CLN8-212ENST00000637083 DEFB103AP81534 67 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 LIPEQ05469 1076 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 AP5B1Q2VPB7 878 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 MTX3Q5HYI7 312 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 PITRM1Q5JRX3 1037 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 C6orf52Q5T4I8 152 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 TMC8Q8IU68 726 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 SPPL2CQ8IUH8 684 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 FAM9CQ8IZT9 166 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 GLB1L3Q8NCI6 653 aaPredicted RBP11.93□□□□□ -0.5
CLN8-212ENST00000637083 PHC3Q8NDX5 983 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 DNAJB14Q8TBM8 379 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 PROKR1Q8TCW9 393 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 ZFAND2BQ8WV99 257 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 VPS33AQ96AX1 596 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 LRCH3Q96II8 777 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 COPS8Q99627 209 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 C17orf80Q9BSJ5 609 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 HAUS8Q9BT25 410 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 C9orf16Q9BUW7 83 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 NTMT1Q9BV86 223 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 LRRC3Q9BY71 257 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 ZBP1Q9H171 429 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 VCX3AQ9NNX9 186 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 ASAH2Q9NR71 780 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 UBAP1Q9NZ09 502 aa11.93□□□□□ -0.5
CLN8-212ENST00000637083 COL4A6Q14031 1691 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 A0A0U1RQS6 177 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 LSM1O15116 133 aaKnown RBP11.92□□□□□ -0.5
CLN8-212ENST00000637083 GMNNO75496 209 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 TIPRLO75663 272 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 POP4O95707 220 aaKnown RBP11.92□□□□□ -0.5
CLN8-212ENST00000637083 GUCA1CO95843 209 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 SPATA31D3P0C874 917 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 EPB42P16452 691 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 ITGB6P18564 788 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 JAK1P23458 1154 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 DDX6P26196 483 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLN8-212ENST00000637083 CASP2P42575 452 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 ZFP36L2P47974 494 aaKnown RBP11.92□□□□□ -0.5
CLN8-212ENST00000637083 HSPA7P48741 367 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 WDR5P61964 334 aaKnown RBP11.92□□□□□ -0.5
CLN8-212ENST00000637083 CREB5Q02930 508 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 PRKCQQ04759 706 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 TRAF3Q13114 568 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 NRF1Q16656 503 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 FOXB2Q5VYV0 432 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 C22orf39Q6P5X5 142 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 CRTC1Q6UUV9 634 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 SPATA31D4Q6ZUB0 917 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 TBC1D21Q8IYX1 336 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 SFRP1Q8N474 314 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 TRPV3Q8NET8 790 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 TNIP2Q8NFZ5 429 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 DIS3LQ8TF46 1054 aaKnown RBP11.92□□□□□ -0.5
CLN8-212ENST00000637083 ECHDC3Q96DC8 303 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 CENPNQ96H22 339 aaPredicted RBP11.92□□□□□ -0.5
CLN8-212ENST00000637083 CDK15Q96Q40 435 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 BOCQ9BWV1 1114 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 APOL5Q9BWW9 433 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 SLC2A11Q9BYW1 496 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 SLC29A3Q9BZD2 475 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 CRISPLD2Q9H0B8 497 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 TNKS2Q9H2K2 1166 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 NSUN3Q9H649 340 aaKnown RBP11.92□□□□□ -0.5
CLN8-212ENST00000637083 THEGQ9P2T0 379 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 EGFL7Q9UHF1 273 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 MAGEL2Q9UJ55 1249 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 ASB1Q9Y576 335 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 COMMD3-BMI1R4GMX3 469 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 KIAA1671Q9BY89 1806 aa11.92□□□□□ -0.5
CLN8-212ENST00000637083 KPNA5O15131 536 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 TAPBPO15533 448 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 GPR39O43194 453 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 ULK1O75385 1050 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 ZNF821O75541 412 aaPredicted RBP11.91□□□□□ -0.5
CLN8-212ENST00000637083 FGF18O76093 207 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 C8AP07357 584 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 CNPP09543 421 aaKnown RBP11.91□□□□□ -0.5
CLN8-212ENST00000637083 UGT1A6P19224 532 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 UGT1A1P22309 533 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 UGT1A4P22310 534 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 UGT1A3P35503 534 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 UGT1A5P35504 534 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 POLE2P56282 527 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 CDKL1Q00532 357 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 DMC1Q14565 340 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 CYP51A1Q16850 503 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 IMPG1Q17R60 797 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 TIGD2Q4W5G0 525 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 CARD16Q5EG05 197 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 PAGE3Q5JUK9 113 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 DGKKQ5KSL6 1271 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 TMTC4Q5T4D3 741 aa11.91□□□□□ -0.5
CLN8-212ENST00000637083 CACHD1Q5VU97 1274 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms