RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 NR0B2Q15466 257 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 KBTBD12Q3ZCT8 623 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 CNSTQ6PJW8 725 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 LRRTM4Q86VH4 590 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 GALNT13Q8IUC8 556 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 IFI44Q8TCB0 444 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 SCG3Q8WXD2 468 aaKnown RBP18.32■□□□□ 0.52
PNKP-224ENST00000631020 NAT6Q93015 286 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 GRAMD1AQ96CP6 724 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 DEPDC7Q96QD5 511 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 FUT8Q9BYC5 575 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 CLPBQ9H078 707 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 INTS10Q9NVR2 710 aaKnown RBP18.32■□□□□ 0.52
PNKP-224ENST00000631020 ZFATQ9P243 1243 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 GPR34Q9UPC5 381 aa18.32■□□□□ 0.52
PNKP-224ENST00000631020 A0A087WV48 116 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 PRMT5O14744 637 aaPredicted RBP18.31■□□□□ 0.52
PNKP-224ENST00000631020 YY2O15391 372 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 RIPK2O43353 540 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 FMO4P31512 558 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 BCL7AQ4VC05 210 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 RNF187Q5TA31 235 aaPredicted RBP18.31■□□□□ 0.52
PNKP-224ENST00000631020 CHST15Q7LFX5 561 aaPredicted RBP18.31■□□□□ 0.52
PNKP-224ENST00000631020 NRROSQ86YC3 692 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 TRAPPC5Q8IUR0 188 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 WDR48Q8TAF3 677 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 UHMK1Q8TAS1 419 aaKnown RBP18.31■□□□□ 0.52
PNKP-224ENST00000631020 OR2M4Q96R27 311 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 ABCG4Q9H172 646 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 TRNAU1APQ9NX07 287 aaKnown RBP18.31■□□□□ 0.52
PNKP-224ENST00000631020 OGFRQ9NZT2 677 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 GULP1Q9UBP9 304 aa18.31■□□□□ 0.52
PNKP-224ENST00000631020 UBA6A0AVT1 1052 aaPredicted RBP18.3■□□□□ 0.52
PNKP-224ENST00000631020 KMOO15229 486 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 POP7O75817 140 aaKnown RBP18.3■□□□□ 0.52
PNKP-224ENST00000631020 AP2A2O94973 939 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 TUBBP07437 444 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 CTSEP14091 401 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 RPS3P23396 243 aaKnown RBP eCLIP18.3■□□□□ 0.52
PNKP-224ENST00000631020 STX2P32856 288 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 ABCG1P45844 678 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 PRLHRP49683 370 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 ADARP55265 1226 aaKnown RBP18.3■□□□□ 0.52
PNKP-224ENST00000631020 CTBSQ01459 385 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 EFTUD2Q15029 972 aaKnown RBP eCLIP18.3■□□□□ 0.527e-7■■■■■ 37.5
PNKP-224ENST00000631020 PLA2G4EQ3MJ16 856 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 CTSL3PQ5NE16 218 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 ZNF549Q6P9A3 640 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 KIAA0408Q6ZU52 694 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 MAPK15Q8TD08 544 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 ZNF514Q96K75 400 aaPredicted RBP18.3■□□□□ 0.52
PNKP-224ENST00000631020 MCMBPQ9BTE3 642 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 COL27A1Q8IZC6 1860 aaPredicted RBP18.3■□□□□ 0.52
PNKP-224ENST00000631020 RP1P56715 2156 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 PIKFYVEQ9Y2I7 2098 aa18.3■□□□□ 0.52
PNKP-224ENST00000631020 IQCF5A8MTL0 148 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 TCEA3O75764 348 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 ACP5P13686 325 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 AK4P27144 223 aaPredicted RBP18.29■□□□□ 0.52
PNKP-224ENST00000631020 PHBP35232 272 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 EIF3BP55884 814 aaKnown RBP18.29■□□□□ 0.52
PNKP-224ENST00000631020 SLC29A2Q14542 456 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 GUSBP11Q6P575 273 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 XKR5Q6UX68 686 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 EFL1Q7Z2Z2 1120 aaKnown RBP18.29■□□□□ 0.52
PNKP-224ENST00000631020 STRA8Q7Z7C7 330 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 GALNT7Q86SF2 657 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 GKN2Q86XP6 184 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 SLC35F3Q8IY50 421 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 GABPB2Q8TAK5 448 aaPredicted RBP18.29■□□□□ 0.52
PNKP-224ENST00000631020 LKAAEAR1Q8TD35 194 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 GPBAR1Q8TDU6 330 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 ACSS3Q9H6R3 686 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 LHX6Q9UPM6 363 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 DNMT3AQ9Y6K1 912 aaPredicted RBP18.29■□□□□ 0.52
PNKP-224ENST00000631020 AK5Q9Y6K8 562 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 NBEAQ8NFP9 2946 aa18.29■□□□□ 0.52
PNKP-224ENST00000631020 PRR19A6NJB7 356 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 PFDN6O15212 129 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 MYF5P13349 255 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 UAP1Q16222 522 aaPredicted RBP18.28■□□□□ 0.52
PNKP-224ENST00000631020 ZNF658BQ4V348 819 aaPredicted RBP18.28■□□□□ 0.52
PNKP-224ENST00000631020 EMBQ6PCB8 327 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 SLC26A11Q86WA9 606 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 LRRC6Q86X45 466 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 CTAGE3PQ8IX95 158 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 KRT222Q8N1A0 295 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 PPM1NQ8N819 430 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 ARL10Q8N8L6 244 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 CDKL2Q92772 493 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 CAVIN3Q969G5 261 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 LINC00615Q96LM1 132 aaPredicted RBP18.28■□□□□ 0.52
PNKP-224ENST00000631020 DOLKQ9UPQ8 538 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 KCNK6Q9Y257 313 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 VPS9D1Q9Y2B5 631 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 CPED1A4D0V7 1026 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 FAM155BO75949 473 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 ESR1P03372 595 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 ABHD2P08910 425 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 OR56A5P0C7T3 313 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms