RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 P3H1Q32P28 736 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PTPN20Q4JDL3 420 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TFDP3Q5H9I0 405 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 EFHC1Q5JVL4 640 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 FAM102AQ5T9C2 384 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 RNASEH2BQ5TBB1 312 aaKnown RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 Q6ZS46 218 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PRUNE1Q86TP1 453 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TTC7BQ86TV6 843 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 VASH2Q86V25 355 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SDR16C5Q8N3Y7 309 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 TAAR9Q96RI9 348 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SLC12A9Q9BXP2 914 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 MS4A5Q9H3V2 200 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PCDH9Q9HC56 1237 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SLC40A1Q9NP59 571 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PIGVQ9NUD9 493 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 NLGN3Q9NZ94 848 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PISDQ9UG56 409 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CBLCQ9ULV8 474 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SHOC2Q9UQ13 582 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ERBB2P04626 1255 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ADRB3P13945 408 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 CTSEP14091 401 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 XPAP23025 273 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 GJC1P36383 396 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 MAGEA4P43358 317 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 MAPK10P53779 464 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 RNF4P78317 190 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 FGL2Q14314 439 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 FZD2Q14332 565 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ATXN7L2Q5T6C5 722 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ICE2Q659A1 982 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 RBM44Q6ZP01 1051 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 B3GNT8Q7Z7M8 397 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 SCML4Q8N228 414 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 TSACCQ96A04 125 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 HIC2Q96JB3 615 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 BMFQ96LC9 184 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 TTC25Q96NG3 672 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 RBM15Q96T37 977 aaKnown RBP eCLIP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 DUSP23Q9BVJ7 150 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 HDAC8Q9BY41 377 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 FRMD8P1Q9BZ68 369 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 CPEB1Q9BZB8 566 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 NSRP1Q9H0G5 558 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 SEMA6CQ9H3T2 930 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 C14orf119Q9NWQ9 140 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 TPX2Q9ULW0 747 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 AP4E1Q9UPM8 1137 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ARHGEF17Q96PE2 2063 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 A0A1W2PNU3 283 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 SIGLEC16A6NMB1 481 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 NDC80O14777 642 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 LRCH4O75427 683 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 GCATO75600 419 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 CELA2BP08218 269 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ZSCAN5DPP0CG00 497 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 GIMD1P0DJR0 217 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 PECAM1P16284 738 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 TSHRP16473 764 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 CETN2P41208 172 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 SLC18A1P54219 525 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 CDH4P55283 916 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 RPS21P63220 83 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 SRSF11Q05519 484 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 CGB2Q6NT52 195 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 RETSATQ6NUM9 610 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 BBS12Q6ZW61 710 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 PARS2Q7L3T8 475 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 TMEM110Q86TL2 294 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 XYLT1Q86Y38 959 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 SLC35F3Q8IY50 421 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 RNF31Q96EP0 1072 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ALG14Q96F25 216 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 C9orf72Q96LT7 481 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 SLC46A1Q96NT5 459 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC3Q9BQI4 270 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 HEPHQ9BQS7 1158 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 RDH14Q9HBH5 336 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ASCL3Q9NQ33 180 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 STAP1Q9ULZ2 295 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ENTPD2Q9Y5L3 495 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 DIDO1Q9BTC0 2240 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ITPR2Q14571 2701 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 SPTY2D1-AS1A0A0U1RR47 76 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 FOXO6A8MYZ6 492 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ALOX15BO15296 676 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 PRPF4O43172 522 aaKnown RBP eCLIP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ETS1P14921 441 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 BRAFP15056 766 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ITIH1P19827 911 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 IL1R2P27930 398 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 RFC1P35251 1148 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 NUDT1P36639 197 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ACVRL1P37023 503 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 GABRB2P47870 512 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ARSEP51690 589 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ERVPABLB-1P60509 514 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 FASTKD3Q14CZ7 662 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms