RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 HP1BP3Q5SSJ5 553 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 BORAQ6PGQ7 559 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 KDELC1Q6UW63 502 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 HSD11B1LQ7Z5J1 315 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 PTRH1Q86Y79 214 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 PGBD5Q8N414 524 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 BMPERQ8N8U9 685 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 OR4D9Q8NGE8 314 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 UHMK1Q8TAS1 419 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 DTD2Q96FN9 168 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 MGME1Q9BQP7 344 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 NT5MQ9NPB1 228 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 OCIAD1Q9NX40 245 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 MOCS1Q9NZB8 636 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 VPS18Q9P253 973 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 SLC17A4Q9Y2C5 497 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 EXOC1LA0A1B0GW35 172 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 TLDC2A0PJX2 215 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 CLEC18AA5D8T8 446 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 SOD1P00441 154 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 ETV3P41162 512 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 GNPDA1P46926 289 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 POLE2P56282 527 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 ILF3Q12906 894 aaKnown RBP eCLIP23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 TRA2AQ13595 282 aaKnown RBP eCLIP23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 SKIDA1Q1XH10 827 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 FAM182AQ5T1J6 154 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 SLC30A9Q6PML9 568 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 CLEC18BQ6UXF7 455 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 TMEM135Q86UB9 458 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 ARFGAP2Q8N6H7 521 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 CLEC18CQ8NCF0 446 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 OR52K1Q8NGK4 314 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 FAM76AQ8TAV0 307 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 GSDMBQ8TAX9 411 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 FBF1Q8TES7 1133 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 SCARF2Q96GP6 870 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 TBL1YQ9BQ87 522 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 DDA1Q9BW61 102 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 PLAC1Q9HBJ0 212 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 PHPT1Q9NRX4 125 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 AKAP7Q9P0M2 348 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 PCDHGC4Q9Y5F7 938 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 ACTL7BQ9Y614 415 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 USP9YO00507 2555 aaPredicted RBP23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 TCRBV9S1A1TA0A576 114 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 MPSTP25325 297 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 VIPR1P32241 457 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 NIPAL4Q0D2K0 466 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 KCNAB2Q13303 367 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 ZNF235Q14590 738 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 LONRF1Q17RB8 773 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 DENND5AQ6IQ26 1287 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 UNC5AQ6ZN44 842 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 DNAAF3Q8N9W5 541 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 SPATA22Q8NHS9 363 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 EPS8L3Q8TE67 593 aaKnown RBP23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 PDP2Q9P2J9 529 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 ANKMY1Q9P2S6 941 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 MAD1L1Q9Y6D9 718 aa23.77■■□□□ 1.4
CAPNS1-216ENST00000628306 FAM237BA0A1B0GVD1 139 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 LOC285095A0A1B0GVY8 99 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 C1QAP02745 245 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 POLBP06746 335 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 MMP2P08253 660 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 MGAT1P26572 445 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 TEAD1P28347 426 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 ATP1A2P50993 1020 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 WNT3AP56704 352 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 SPARCL1Q14515 664 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 SPANXN3Q5MJ09 141 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 ADGRD1Q6QNK2 874 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 RFLNAQ6ZTI6 216 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 AGBL5Q8NDL9 886 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 MRGPRX2Q96LB1 330 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 TUBD1Q9UJT1 453 aa23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 NOVA2Q9UNW9 492 aaKnown RBP23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 USP9XQ93008 2570 aaPredicted RBP23.76■■□□□ 1.39
CAPNS1-216ENST00000628306 TEX15Q9BXT5 2789 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 A0A0U1RQS6 177 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 NPIPB15A6NHN6 443 aaPredicted RBP23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 MT-CYBP00156 380 aaPredicted RBP23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 GCAP28676 217 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 SESN2P58004 480 aaPredicted RBP23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 TRAF2Q12933 501 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 NAB1Q13506 487 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 Q6ZVL8 140 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 TECPR1Q7Z6L1 1165 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 TSPAN33Q86UF1 283 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 MPP5Q8N3R9 675 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 KIFC1Q9BW19 673 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 MRM3Q9HC36 420 aaKnown RBP23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 SAMD15Q9P1V8 674 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 ZNF180Q9UJW8 692 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 PILRAQ9UKJ1 303 aa23.75■■□□□ 1.39
CAPNS1-216ENST00000628306 UTP20O75691 2785 aaKnown RBP23.74■■□□□ 1.39
CAPNS1-216ENST00000628306 B4E171 279 aa23.74■■□□□ 1.39
CAPNS1-216ENST00000628306 F5H423 210 aaPredicted RBP23.74■■□□□ 1.39
CAPNS1-216ENST00000628306 RAD1O60671 282 aa23.74■■□□□ 1.39
CAPNS1-216ENST00000628306 SOCS5O75159 536 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms