RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 USP30Q70CQ3 517 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 FAM124AQ86V42 546 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 KBTBD6Q86V97 674 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 CRLF3Q8IUI8 442 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 CACNA2D3Q8IZS8 1091 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 MYO1HQ8N1T3 1032 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 BEND7Q8N7W2 519 aaPredicted RBP9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 RASGEF1AQ8N9B8 481 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 CCDC197Q8NCU1 140 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 FLCNQ8NFG4 579 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 MAFAQ8NHW3 353 aaPredicted RBP9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 STAG3L4Q8TBR4 150 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 KLK6Q92876 244 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 CCDC126Q96EE4 140 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 PHF21BQ96EK2 531 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 PDLIM5Q96HC4 596 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 LENG8Q96PV6 779 aaPredicted RBP9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 ATOH8Q96SQ7 321 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 SORT1Q99523 831 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 OSBPL6Q9BZF3 934 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 LMAN1LQ9HAT1 526 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 NPHS2Q9NP85 383 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 NCKIPSDQ9NZQ3 722 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 KLHL42Q9P2K6 505 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 FZD4Q9ULV1 537 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 RNF112Q9ULX5 631 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 SORCS3Q9UPU3 1222 aa9.77□□□□□ -0.85
SOX2-OT-244ENST00000627738 TBC1D3DA0A087WVF3 549 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TBC1D3IA0A087WXS9 549 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TBC1D3EA0A087X179 549 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TBC1D3KA0A087X1G2 549 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 A0A1W2PQU0 124 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 SERTM1A2A2V5 107 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 KRBA1A5PL33 1030 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 FAM181BA6NEQ2 426 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TBC1D3FA6NER0 549 aaPredicted RBP9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 SUPT3HB4E1H0 165 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TBC1D3LB9A6J9 549 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 QSOX1O00391 747 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 SUPT3HO75486 399 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 IPO13O94829 963 aaKnown RBP9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TGDSO95455 350 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 HSPA4LO95757 839 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 PAK4O96013 591 aaPredicted RBP9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 FTH1P02794 183 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TBC1D3HP0C7X1 549 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TPBGLP0DKB5 382 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 CBSLP0DN79 551 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TROVE2P10155 538 aaKnown RBP eCLIP9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 KITP10721 976 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 MTHFD2P13995 350 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 GABRG2P18507 467 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 AOAHP28039 575 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 ARRB2P32121 409 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 CBSP35520 551 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 CCR10P46092 362 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 PRLHRP49683 370 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 NAGLUP54802 743 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 SFSWAPQ12872 951 aaKnown RBP9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 SGCGQ13326 291 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 LRRC32Q14392 662 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 UBXN2BQ14CS0 331 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 IRF4Q15306 451 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 ZSCAN26Q16670 478 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TBC1D3GQ6DHY5 549 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TBC1D3CQ6IPX1 549 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 ADAMTSL4Q6UY14 1074 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 CYHR1Q6ZMK1 362 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 ADGRG6Q86SQ4 1221 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 HEATR4Q86WZ0 1026 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 HORMAD1Q86X24 394 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 SLC22A9Q8IVM8 553 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TBC1D3Q8IZP1 549 aaPredicted RBP9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 CCNYL1Q8N7R7 359 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 PTGR2Q8N8N7 351 aaPredicted RBP9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 ZSCAN1Q8NBB4 408 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TP53I13Q8NBR0 393 aaPredicted RBP9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 RFWD2Q8NHY2 731 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 PPP4R1Q8TF05 950 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 HMGB4Q8WW32 186 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 ELMO1Q92556 727 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 FUBP1Q96AE4 644 aaKnown RBP9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 HIC2Q96JB3 615 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TMEM237Q96Q45 408 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TRIM55Q9BYV6 548 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 OR2AG1Q9H205 316 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 TRIM39Q9HCM9 518 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 PREBQ9HCU5 417 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 LTB4R2Q9NPC1 389 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 CD93Q9NPY3 652 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 MBNL1Q9NR56 388 aaKnown RBP9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 KLHL14Q9P2G3 628 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 WNT16Q9UBV4 365 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 FBXL21Q9UKT6 434 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 DNAJC16Q9Y2G8 782 aa9.76□□□□□ -0.85
SOX2-OT-244ENST00000627738 CCDC189A1A4V9 331 aa9.75□□□□□ -0.85
SOX2-OT-244ENST00000627738 NCF1BA6NI72 391 aaPredicted RBP9.75□□□□□ -0.85
SOX2-OT-244ENST00000627738 SYCE1LA8MT33 242 aa9.75□□□□□ -0.85
SOX2-OT-244ENST00000627738 NCF1CA8MVU1 366 aaPredicted RBP9.75□□□□□ -0.85
SOX2-OT-244ENST00000627738 CHURC1-FNTBB4DL54 471 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms