RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SMPD3Q9NY59 655 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-209ENST00000627620 MBD2Q9UBB5 411 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 CLEC4AQ9UMR7 237 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 PRPS2P11908 318 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 UNGP13051 313 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 MNDAP41218 407 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 MASP1P48740 699 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 DRICH1Q6PGQ1 229 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 NLGN2Q8NFZ4 835 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 FAR1Q8WVX9 515 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 NTPCRQ9BSD7 190 aaKnown RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 ARL5AQ9Y689 179 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 PLIN4Q96Q06 1357 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 EME2A4GXA9 379 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 RHPN2P1A8MT19 583 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 MAGEB17A8MXT2 336 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 C9P02748 559 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 RYKP34925 604 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 SLC1A2P43004 574 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 HADHBP55084 474 aaKnown RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 GRB14Q14449 540 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 SOWAHAQ2M3V2 549 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 LRRC73Q5JTD7 316 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 AHI1Q8N157 1196 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 FUBP3Q96I24 572 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 NPHS1O60500 1241 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 DNAJA2O60884 412 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 YAP1P46937 504 aaKnown RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 TAS2R39P59534 338 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 STXBP1P61764 594 aaKnown RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 MCEMP1Q8IX19 187 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 OR10A6Q8NH74 314 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 DGCR14Q96DF8 476 aaKnown RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 ART5Q96L15 291 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 GPER1Q99527 375 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 CNPPD1Q9BV87 410 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 INTS10Q9NVR2 710 aaKnown RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 RIIAD1A6NNX1 92 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 PLK4O00444 970 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 TCF4P15884 667 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 PRR5P85299 388 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 HEPACAMQ14CZ8 416 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 CXorf57Q6NSI4 855 aaKnown RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 UTS2BQ765I0 119 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 SNX20Q7Z614 316 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 TTC29Q8NA56 475 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 SLC22A17Q8WUG5 538 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 WDR12Q9GZL7 423 aaKnown RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 SIX2Q9NPC8 291 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 RPS9P46781 194 aaKnown RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 PPP2R2BQ00005 443 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 LDLRAP1Q5SW96 308 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 KIAA0930Q6ICG6 404 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 ZNF433Q8N7K0 673 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-209ENST00000627620 HM13Q8TCT9 377 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 RASSF5Q8WWW0 418 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 KAT2AQ92830 837 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 ROPN1LQ96C74 230 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 SRMSQ9H3Y6 488 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 C1orf109Q9NX04 203 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 RAB26Q9ULW5 256 aa12.64□□□□□ -0.39
SCN8A-209ENST00000627620 ARHGEF33A8MVX0 844 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 HCN1O60741 890 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 CCR10P46092 362 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 CDH12P55289 794 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 OLFML2AQ68BL7 652 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 CBR4Q8N4T8 237 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 ARNTL2Q8WYA1 636 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 PCBD2Q9H0N5 130 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 DSN1Q9H410 356 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 ELOVL2Q9NXB9 296 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 RBPJLQ9UBG7 517 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 GPIP06744 558 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 CSKP41240 450 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 IL18R1Q13478 541 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 DPYSL2Q16555 572 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 RNASE12Q5GAN4 147 aaKnown RBP12.63□□□□□ -0.39
SCN8A-209ENST00000627620 NRSN1Q8IZ57 195 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 RIPOR3Q96MK2 946 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 GAL3ST4Q96RP7 486 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 KCNN2Q9H2S1 579 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 ZDHHC4Q9NPG8 344 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 TLR6Q9Y2C9 796 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 NR2E1Q9Y466 385 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 PCDHGA11Q9Y5H2 935 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 GABRDO14764 452 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 ADAMDEC1O15204 470 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 AP2A2O94973 939 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 NCK1P16333 377 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 EFNA1P20827 205 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-209ENST00000627620 ZNF280AP59817 542 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-209ENST00000627620 TRMT10BQ6PF06 316 aaKnown RBP12.63□□□□□ -0.39
SCN8A-209ENST00000627620 CLEC20AQ6ZU45 233 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 HID1Q8IV36 788 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 GJD3Q8N144 294 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 LEMD2Q8NC56 503 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 PIGXQ8TBF5 258 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms