RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 SLC26A11Q86WA9 606 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 TRIM48Q8IWZ4 208 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 KRT222Q8N1A0 295 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 SFRP1Q8N474 314 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 SLC37A2Q8TED4 501 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 PATE1Q8WXA2 126 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 TMEM159Q96B96 161 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 NINJ2Q9NZG7 142 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 TXNDC16Q9P2K2 825 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 PSMD13Q9UNM6 376 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 APOBEC2Q9Y235 224 aaKnown RBP18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 U3KQA8 63 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 RP1P56715 2156 aa18.73■□□□□ 0.59
SQSTM1-216ENST00000626660 SPAARA0A1B0GVQ0 90 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 EME2A4GXA9 379 aaPredicted RBP18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 RHPN2P1A8MT19 583 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 IQCF5A8MTL0 148 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 F7P08709 466 aaPredicted RBP18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 CHRM3P20309 590 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 ILF2Q12905 390 aaKnown RBP18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 BRD3Q15059 726 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 CCDC157Q569K6 752 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 GUSBP11Q6P575 273 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 OTOAQ7RTW8 1153 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 EFL1Q7Z2Z2 1120 aaKnown RBP18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 C17orf82Q86X59 251 aaPredicted RBP18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 SFTPA2Q8IWL1 248 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 ARL14Q8N4G2 192 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 LKAAEAR1Q8TD35 194 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 ASZ1Q8WWH4 475 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.72■□□□□ 0.593e-7■■■■■ 32.1
SQSTM1-216ENST00000626660 CXorf40BQ96DE9 158 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 WWP1Q9H0M0 922 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 CDC42EP4Q9H3Q1 356 aaKnown RBP18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 ANKZF1Q9H8Y5 726 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 SARS2Q9NP81 518 aaKnown RBP18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 SLC17A6Q9P2U8 582 aa18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 CORO1CQ9ULV4 474 aaPredicted RBP18.72■□□□□ 0.59
SQSTM1-216ENST00000626660 FAM159BA6NKW6 160 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 IFRD1O00458 451 aaPredicted RBP18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 GIPC1O14908 333 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 NUDT21O43809 227 aaKnown RBP18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 NIPSNAP2O75323 286 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 AHSGP02765 367 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 GLB1P16278 677 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 AOAHP28039 575 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 CCR7P32248 378 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 PREPP48147 710 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 ACADVLP49748 655 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 ILKQ13418 452 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 ZNF658BQ4V348 819 aaPredicted RBP18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 STRA8Q7Z7C7 330 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 CTAGE3PQ8IX95 158 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 LILRA3Q8N6C8 439 aaPredicted RBP18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 IFI44Q8TCB0 444 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 FBF1Q8TES7 1133 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 SH3KBP1Q96B97 665 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 LRIT1Q9P2V4 623 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 PCDHGA1Q9Y5H4 931 aa18.71■□□□□ 0.59
SQSTM1-216ENST00000626660 SLC5A10A0PJK1 596 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 ZW10O43264 779 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 VPS26AO75436 327 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 RFPL3O75679 317 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 VIPP01282 170 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 GP1BAP07359 652 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 CDK4P11802 303 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 BRAFP15056 766 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 XRCC1P18887 633 aaPredicted RBP18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 MCM3P25205 808 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 FASLGP48023 281 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 CSE1LP55060 971 aaKnown RBP18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 HHEXQ03014 270 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 DNAH14Q0VDD8 3507 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 HSPA14Q0VDF9 509 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 NAB1Q13506 487 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 PLEKHS1Q5SXH7 462 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 TRMT10CQ7L0Y3 403 aaKnown RBP18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 GSPT2Q8IYD1 628 aaKnown RBP18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 KCNJ9Q92806 393 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 CCDC74AQ96AQ1 378 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 RMDN2Q96LZ7 410 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 C12orf66Q96MD2 445 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 AARSD1Q9BTE6 412 aaKnown RBP18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 OR52A5Q9H2C5 316 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 POT1Q9NUX5 634 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 IMP3Q9NV31 184 aaKnown RBP18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 SCHIP1Q9P0W5 487 aaPredicted RBP18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 CPNE7Q9UBL6 633 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 WDR37Q9Y2I8 494 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 HEBP2Q9Y5Z4 205 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 RNF215Q9Y6U7 377 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 V9GYY5 206 aaPredicted RBP18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 SPTBN2O15020 2390 aa18.7■□□□□ 0.58
SQSTM1-216ENST00000626660 OR52A4PA6NMU1 304 aa18.69■□□□□ 0.58
SQSTM1-216ENST00000626660 ACSL3O95573 720 aa18.69■□□□□ 0.58
SQSTM1-216ENST00000626660 FTH1P19P0C7X4 201 aa18.69■□□□□ 0.58
SQSTM1-216ENST00000626660 MTHFD1P11586 935 aaKnown RBP18.69■□□□□ 0.58
SQSTM1-216ENST00000626660 PNLIPP16233 465 aa18.69■□□□□ 0.58
SQSTM1-216ENST00000626660 GABRB3P28472 473 aa18.69■□□□□ 0.58
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