RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ACSL5Q9ULC5 683 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 RGPD3A6NKT7 1758 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 RGPD4Q7Z3J3 1758 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 A0A0U1RQS6 177 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 OR6C74A6NCV1 312 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SOBPA7XYQ1 873 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 MAFKO60675 156 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 PRMT3O60678 531 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TCN1P20061 433 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 OGNP20774 298 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 HOXC8P31273 242 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 BUD31P41223 144 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 PGDP52209 483 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SKOR1P84550 965 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SMAD2Q15796 467 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SLC9A4Q6AI14 798 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 GPRIN3Q6ZVF9 776 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 PIWIL4Q7Z3Z4 852 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 CMKLR1Q99788 373 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TRIM39Q9HCM9 518 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 ITM2CQ9NQX7 267 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 KLHL28Q9NXS3 571 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SLC2A6Q9UGQ3 507 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 RARRES3Q9UL19 164 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 NBASA2RRP1 2371 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 QSER1Q2KHR3 1735 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 E9PBE3 544 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 FAM189A1O60320 539 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 KLHL41O60662 606 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 ENO1P06733 434 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 PRKCHP24723 683 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 AK4P27144 223 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 NUDT1P36639 197 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 HPCAL1P37235 193 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 EIF2DP41214 584 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 POLD2P49005 469 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 IRAK1P51617 712 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SRP54P61011 504 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 NKX3-2P78367 333 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 IFI35P80217 286 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 FOXC1Q12948 553 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 HTR4Q13639 388 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 ELOAQ14241 798 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 FAM92BQ6ZTR7 304 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 ARCQ7LC44 396 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 UNC5BQ8IZJ1 945 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TMEM132CQ8N3T6 1108 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 ZFP28Q8NHY6 868 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TSGA13Q96PP4 275 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 HBEGFQ99075 208 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 AGAP2Q99490 1192 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 RBBP8Q99708 897 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TRIM15Q9C019 465 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 PCBD2Q9H0N5 130 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 MAGEE1Q9HCI5 957 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TMEM9BQ9NQ34 198 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 MTF2Q9Y483 593 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 CACNA1BQ00975 2339 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SPTAN1Q13813 2472 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 NR5A2O00482 541 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TRAFD1O14545 582 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TNFRSF10BO14763 440 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 LIN7AO14910 233 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 POLR1CO15160 346 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 PIM1P11309 404 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 GLULP15104 373 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 ITPKBP27987 946 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 BDKRB1P46663 353 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 STXBP1P61764 594 aaKnown RBP8.94□□□□□ -0.98
HDAC9-229ENST00000622668 C9orf64Q5T6V5 341 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 LRIG3Q6UXM1 1119 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 TMEM156Q8N614 296 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SLC35B2Q8TB61 432 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 ARRDC3Q96B67 414 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 SLC6A18Q96N87 628 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 GBP5Q96PP8 586 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 IL21Q9HBE4 155 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 AURKCQ9UQB9 309 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 BTRCQ9Y297 605 aa8.94□□□□□ -0.98
HDAC9-229ENST00000622668 ATP6AP2A0A1C7CYW4 349 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 PRRT4C9JH25 899 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 ATP6AP2O75787 350 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 LRATO95237 230 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 MLYCDO95822 493 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 C8GP07360 202 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 HNRNPLP14866 589 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 S100A3P33764 101 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 HADHBP55084 474 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 TAS2R39P59534 338 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 MAD2L1Q13257 205 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 DUOXA1Q1HG43 343 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 FAM214AQ32MH5 1076 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 CCNYL2Q5T2Q4 361 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 ASTLQ6HA08 431 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 PAQR3Q6TCH7 311 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 SUSD1Q6UWL2 747 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 ZNF707Q96C28 371 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 MCMBPQ9BTE3 642 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 TUBB6Q9BUF5 446 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 PREBQ9HCU5 417 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms