RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TMEM164Q5U3C3 297 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 GLYATQ6IB77 296 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF782Q6ZMW2 699 aaPredicted RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF433Q8N7K0 673 aaPredicted RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF709Q8N972 641 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 MFSD2AQ8NA29 543 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 SLC5A5Q92911 643 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 LPIN3Q9BQK8 851 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 SCP2D1Q9UJQ7 156 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 DISC1C4P0D8 188 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 TLX3O43711 291 aaPredicted RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ARL6IP5O75915 188 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 LINGO3P0C6S8 592 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 DHPSP49366 369 aaPredicted RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 RGS19P49795 217 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 RPL38P63173 70 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 PCBP1Q15365 356 aaKnown RBP eCLIP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 SLC9B1Q4ZJI4 515 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CXorf57Q6NSI4 855 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 SYVN1Q86TM6 617 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CCDC71Q8IV32 467 aaPredicted RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CLP1Q92989 425 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CEP295NLQ96MC4 621 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 COPS4Q9BT78 406 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 IDI2Q9BXS1 227 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ASB7Q9H672 318 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ELOVL2Q9NXB9 296 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF69Q9UC07 566 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 RHPN2P1A8MT19 583 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 CYB561D2O14569 222 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 SLC9A3R1O14745 358 aaPredicted RBP7.09□□□□□ -1.28
COLCA1-205ENST00000620864 CPNE3O75131 537 aaKnown RBP7.09□□□□□ -1.28
COLCA1-205ENST00000620864 GSTM3P21266 225 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 RBL1P28749 1068 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 PSEN1P49768 467 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 CAPZA1P52907 286 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 GBX2P52951 348 aaPredicted RBP7.09□□□□□ -1.28
COLCA1-205ENST00000620864 SLC6A3Q01959 620 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 CARTPTQ16568 116 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 ALG10BQ5I7T1 473 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 PAQR7Q86WK9 346 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 NRSN1Q8IZ57 195 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 OR5K1Q8NHB7 308 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 OTUB2Q96DC9 234 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 TSNAXQ99598 290 aaKnown RBP7.09□□□□□ -1.28
COLCA1-205ENST00000620864 ABCB9Q9NP78 766 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 OSGEPQ9NPF4 335 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 COPZ2Q9P299 210 aa7.09□□□□□ -1.28
COLCA1-205ENST00000620864 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 KLHL33A6NCF5 533 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 DDTLA6NHG4 134 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 AQP12BA6NM10 295 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 CBX4O00257 560 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SCGB2A1O75556 95 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 HMGN1P05114 100 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 BPGMP07738 259 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GADD45AP24522 165 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ALDH3B2P48448 385 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 IQCCQ4KMZ1 466 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 NKAPLQ5M9Q1 402 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ZCCHC23Q6ZST2 131 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TRABD2AQ86V40 505 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SLC47A2Q86VL8 602 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 AQP12AQ8IXF9 295 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 OR4C6Q8NH72 309 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 EBNA1BP2Q99848 306 aaKnown RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TPK1Q9H3S4 243 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 KCNH7Q9NS40 1196 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SMPD4Q9NXE4 827 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TAS2R3Q9NYW6 316 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 UNC13BO14795 1591 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SLC12A8A0AV02 714 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SOWAHBA6NEL2 793 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 PRORSD1PA6NEY8 169 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TBX1O43435 398 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 UGT1A9O60656 530 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 RASGRP1O95267 797 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 RAP2AP10114 183 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 UGT1A6P19224 532 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 UGT1A1P22309 533 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 UGT1A4P22310 534 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 UGT1A3P35503 534 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 AHSA2Q719I0 299 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 DENND1CQ8IV53 801 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 TMEM86AQ8N2M4 240 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SMG8Q8ND04 991 aaKnown RBP7.08□□□□□ -1.28
COLCA1-205ENST00000620864 SUN3Q8TAQ9 357 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 RHBGQ9H310 441 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ALG2Q9H553 416 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 UGT1A7Q9HAW7 530 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 UGT1A10Q9HAW8 530 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 UGT1A8Q9HAW9 530 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 DNAJB9Q9UBS3 223 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 PCDHGC3Q9UN70 934 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 LRRC42Q9Y546 428 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 DUSP10Q9Y6W6 482 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 GRID2O43424 1007 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 THP07101 528 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ACRP10323 421 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 OR1E1P30953 314 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms