RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PIANPQ8IYJ0 282 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 OR52K1Q8NGK4 314 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 HM13Q8TCT9 377 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 CDKN2AIPNLQ96HQ2 116 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 MAP3K3Q99759 626 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 ARHGAP9Q9BRR9 750 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 TSGA10Q9BZW7 698 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 GPN2Q9H9Y4 310 aaPredicted RBP16.76■□□□□ 0.27
HMGN3-203ENST00000620514 ETNK1Q9HBU6 452 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 IL17BQ9UHF5 180 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 ZNF462Q96JM2 2506 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 COL6A6A6NMZ7 2263 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 IGLV3-16A0A075B6K0 115 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 OR51F1A6NGY5 319 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 CFAP99D6REC4 459 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 H7C0S8 307 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 PSMD3O43242 534 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 KRT86O43790 486 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 IFNB1P01574 187 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 ETS1P14921 441 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 NELFEP18615 380 aaKnown RBP16.75■□□□□ 0.27
HMGN3-203ENST00000620514 ACRV1P26436 265 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 GSDMDP57764 484 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 SNX1Q13596 522 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 GSE1Q14687 1217 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 KCNAB1Q14722 419 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 CAPRIN2Q6IMN6 1127 aaKnown RBP16.75■□□□□ 0.27
HMGN3-203ENST00000620514 CERS6Q6ZMG9 384 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 STYXQ8WUJ0 223 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 HEXDCQ8WVB3 486 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 ULBP3Q9BZM4 244 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 SEMA5BQ9P283 1151 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 SLC24A2Q9UI40 661 aa16.75■□□□□ 0.27
HMGN3-203ENST00000620514 GCN1Q92616 2671 aaKnown RBP16.75■□□□□ 0.27
HMGN3-203ENST00000620514 KLHL33A6NCF5 533 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 OR6C74A6NCV1 312 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 OR5K3A6NET4 321 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 MROH6A6NGR9 719 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 NKX2-8O15522 239 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 KIAA0754O94854 1291 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 FOLR1P15328 257 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 STIP1P31948 543 aaKnown RBP16.74■□□□□ 0.27
HMGN3-203ENST00000620514 GRIA1P42261 906 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 ARCN1P48444 511 aaKnown RBP16.74■□□□□ 0.27
HMGN3-203ENST00000620514 CACNG1Q06432 222 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 ABHD18Q0P651 414 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 DBN1Q16643 649 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 ZNF658BQ4V348 819 aaPredicted RBP16.74■□□□□ 0.27
HMGN3-203ENST00000620514 MEI1Q5TIA1 1274 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 KLHL35Q6PF15 583 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 RASGRP3Q8IV61 690 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 CLDN19Q8N6F1 224 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 GLIS1Q8NBF1 620 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 GALNT6Q8NCL4 622 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 KIAA1143Q96AT1 154 aaPredicted RBP16.74■□□□□ 0.27
HMGN3-203ENST00000620514 SLC45A3Q96JT2 553 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 SLC41A2Q96JW4 573 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 NRTNQ99748 197 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 CCM2Q9BSQ5 444 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 KIR3DX1Q9H7L2 352 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 COG4Q9H9E3 785 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 HRASLS2Q9NWW9 162 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 ZNF148Q9UQR1 794 aa16.74■□□□□ 0.27
HMGN3-203ENST00000620514 C17orf113A0A1B0GUU1 675 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 ZNF891A8MT65 544 aaPredicted RBP16.73■□□□□ 0.27
HMGN3-203ENST00000620514 B8ZZF3 427 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 ARHGAP6O43182 974 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 SPAG6O75602 509 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 TIAF1O95411 115 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 PRKAR1AP10644 381 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 FGF5P12034 268 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 F8A1P23610 371 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 PSMA3P25788 255 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 PDHA2P29803 388 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 STAT5AP42229 794 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 PREPP48147 710 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 IL11RAQ14626 422 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 RPS6KA1Q15418 735 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 SIX1Q15475 284 aaPredicted RBP16.73■□□□□ 0.27
HMGN3-203ENST00000620514 DNTTIP2Q5QJE6 756 aaKnown RBP16.73■□□□□ 0.27
HMGN3-203ENST00000620514 FBXO38Q6PIJ6 1188 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 LINC00523Q86TU6 105 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 OOSP2Q86WS3 158 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 ESX1Q8N693 406 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 DNAAF3Q8N9W5 541 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 SIDT2Q8NBJ9 832 aaKnown RBP16.73■□□□□ 0.27
HMGN3-203ENST00000620514 UBXN4Q92575 508 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 PPM1MQ96MI6 270 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 OR52A5Q9H2C5 316 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 TRIT1Q9H3H1 467 aaKnown RBP16.73■□□□□ 0.27
HMGN3-203ENST00000620514 LZTFL1Q9NQ48 299 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 MRPS18BQ9Y676 258 aaKnown RBP16.73■□□□□ 0.27
HMGN3-203ENST00000620514 PRSS21Q9Y6M0 314 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 RPS6KL1Q9Y6S9 549 aa16.73■□□□□ 0.27
HMGN3-203ENST00000620514 CCDC162PA2VCL2 907 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 EBLN1P0CF75 366 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 ZSCAN5DPP0CG00 497 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 ITGB6P18564 788 aa16.72■□□□□ 0.27
HMGN3-203ENST00000620514 MSNP26038 577 aaKnown RBP16.72■□□□□ 0.27
HMGN3-203ENST00000620514 FOXN2P32314 431 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms