RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 NMBRP28336 390 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 NNMTP40261 264 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 GNPDA1P46926 289 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 TSPAN5P62079 268 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 IRF8Q02556 426 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 CBLBQ13191 982 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 ANKRD46Q86W74 232 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 S100PBPQ96BU1 408 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 ATG4CQ96DT6 458 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 ZNF490Q9ULM2 529 aaPredicted RBP12.97□□□□□ -0.33
COL1A2-213ENST00000620463 SNX6Q9UNH7 406 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 TMX2Q9Y320 296 aa12.97□□□□□ -0.33
COL1A2-213ENST00000620463 SLC15A3Q8IY34 581 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 METTL25Q8N6Q8 603 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 C10orf53Q8N6V4 93 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 TMIEQ8NEW7 156 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 NCSTNQ92542 709 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 KCTD7Q96MP8 289 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 UQCC2Q9BRT2 126 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 NLNQ9BYT8 704 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 SCUBE2Q9NQ36 999 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 MYH15Q9Y2K3 1946 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 FXYD6-FXYD2A0A087WZ82 144 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 TTC34A8MYJ7 566 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 B8ZZF3 427 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 MPZL2O60487 215 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 ARHGEF15O94989 841 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 TNFSF9P41273 254 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 MAP2K3P46734 347 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 SMIM11AP58511 58 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 PPP1R3AQ16821 1122 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 PCDH19Q8TAB3 1148 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 SLC13A3Q8WWT9 602 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 MED8Q96G25 268 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 COL21A1Q96P44 957 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 SLC9A7Q96T83 725 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 FXYD6Q9H0Q3 95 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 KCNK13Q9HB14 408 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 FBRSL1Q9HCM7 1045 aaKnown RBP12.96□□□□□ -0.33
COL1A2-213ENST00000620463 FAM105AQ9NUU6 356 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 UGT2A1Q9Y4X1 527 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 CAPN14A8MX76 684 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 LCN1P31025 176 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 KIR3DL1P43629 444 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 HUNKP57058 714 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 LAPTM4AQ15012 233 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 FAM174BQ3ZCQ3 159 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 IQCCQ4KMZ1 466 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 IDNKQ5T6J7 187 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 LDB1Q86U70 411 aaPredicted RBP12.96□□□□□ -0.33
COL1A2-213ENST00000620463 TEX47Q8TBZ9 253 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 ZNF597Q96LX8 424 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 ALPK1Q96QP1 1244 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 TMEM39BQ9GZU3 492 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 LHX5Q9H2C1 402 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 ASB7Q9H672 318 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 C11orf16Q9NQ32 467 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 FARSBQ9NSD9 589 aaKnown RBP12.96□□□□□ -0.33
COL1A2-213ENST00000620463 CORO2BQ9UQ03 480 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 MAU2Q9Y6X3 613 aa12.96□□□□□ -0.33
COL1A2-213ENST00000620463 RAMP2O60895 175 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 TOXO94900 526 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 CCNDBP1O95273 360 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 SLC25A27O95847 323 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 FGRP09769 529 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 PEPDP12955 493 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 CAP2P40123 477 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 HSDL1Q3SXM5 330 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 AGAP7PQ5VUJ5 663 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 ARSKQ6UWY0 536 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 ZNF567Q8N184 647 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 OR10T2Q8NGX3 314 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 RDH12Q96NR8 316 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 KCNC2Q96PR1 638 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 SEZ6LQ9BYH1 1024 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 BEX1Q9HBH7 125 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 HMGXB4Q9UGU5 601 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 HCN2Q9UL51 889 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 PCDHGB6Q9Y5F9 930 aa12.96□□□□□ -0.34
COL1A2-213ENST00000620463 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 TRAV6A0A075B6T7 132 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 IQCMA0A1B0GVH7 501 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 METTL21EPA6NDL7 271 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 KPNA3O00505 521 aaPredicted RBP12.95□□□□□ -0.34
COL1A2-213ENST00000620463 MTRF1O75570 445 aaKnown RBP12.95□□□□□ -0.34
COL1A2-213ENST00000620463 DNASE1P24855 282 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 WNT3AP56704 352 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 TGFB2P61812 414 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 GRM2Q14416 872 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 CLCA4Q14CN2 919 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 ATP6AP1Q15904 470 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 TEX44Q53QW1 395 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 TRIM40Q6P9F5 258 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 TIFABQ6ZNK6 161 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 DSG4Q86SJ6 1040 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 CFAP206Q8IYR0 622 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 C12orf29Q8N999 325 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 EXOC2Q96KP1 924 aa12.95□□□□□ -0.34
COL1A2-213ENST00000620463 TEFMQ96QE5 360 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms