RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TRAPPC4Q9Y296 219 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 PRELID3BQ9Y3B1 194 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 TRAV6A0A075B6T7 132 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 PIGNO95427 931 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 CHRNGP07510 517 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 HOXC6P09630 235 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 UMPSP11172 480 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 TNNI3P19429 210 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 ITGALP20701 1170 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 HNF4AP41235 474 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 TPMTP51580 245 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 ARSFP54793 590 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 RGS1Q08116 209 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 SEMA5AQ13591 1074 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 KCNC3Q14003 757 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 SURF1Q15526 300 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 TARBP2Q15633 366 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 BTBD16Q32M84 506 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 LAIR2Q6ISS4 152 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 FBXO46Q6PJ61 603 aaPredicted RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 ZPBP2Q6X784 338 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 CMC1Q7Z7K0 106 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 FAM35AQ86V20 835 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 FBXO16Q8IX29 292 aaPredicted RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 NAT16Q8N8M0 369 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 OR8K3Q8NH51 312 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 UFD1Q92890 307 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 ROPN1LQ96C74 230 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 TEKT5Q96M29 485 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 GTPBP2Q9BX10 602 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 HDHD5Q9BXW7 423 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 MRPL4Q9BYD3 311 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 PITHD1Q9GZP4 211 aaPredicted RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 ELOVL4Q9GZR5 314 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 SMOC2Q9H3U7 446 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 RBPJLQ9UBG7 517 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 NUFIP1Q9UHK0 495 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 RAPGEFL1Q9UHV5 662 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 A0A0G2JLL6 359 aaPredicted RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 STX7O15400 261 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 WDPCPO95876 746 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 HPRP00739 348 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 TP53P04637 393 aaPredicted RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 RPS17P08708 135 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 ADORA3P0DMS8 318 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 CYP2C8P10632 490 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 MTHFD1P11586 935 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 LRPAP1P30533 357 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 MAGEA12P43365 314 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 CYP4F2P78329 520 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 CYP4F3Q08477 520 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 EPS8Q12929 822 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 DAG1Q14118 895 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 MEP1AQ16819 746 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 CTU2Q2VPK5 515 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 ZIK1Q3SY52 487 aaPredicted RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 STEAP4Q687X5 459 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 FAM183BPQ6ZVS7 135 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 PRRT2Q7Z6L0 340 aaPredicted RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 WDR48Q8TAF3 677 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 ISL2Q96A47 359 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 ATXN7L3BQ96GX2 97 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 AHCYL2Q96HN2 611 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 NEDD4LQ96PU5 975 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 SDHCQ99643 169 aaPredicted RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 FEM1AQ9BSK4 669 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 SLC25A23Q9BV35 468 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 SNRNP25Q9BV90 132 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 C6orf62Q9GZU0 229 aaPredicted RBP10.23□□□□□ -0.77
VPS11-207ENST00000620429 IL22Q9GZX6 179 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 GHITMQ9H3K2 345 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 OXSMQ9NWU1 459 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 PEX16Q9Y5Y5 336 aa10.23□□□□□ -0.77
VPS11-207ENST00000620429 ATP6AP2A0A1C7CYW4 349 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 C2orf81A6NN90 581 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 NRP2O60462 931 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 TRIM3O75382 744 aaPredicted RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 ALPLP05186 524 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 SNRPB2P08579 225 aaKnown RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 MYL3P08590 195 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 MSH3P20585 1137 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 CYP2F1P24903 491 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 MGAT1P26572 445 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 RFX2P48378 723 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 SP140Q13342 867 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ZMYND11Q15326 602 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 AANATQ16613 207 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 SPATS1Q496A3 300 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 FAM26DQ5JW98 314 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 VARS2Q5ST30 1063 aaKnown RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 LAMTOR1Q6IAA8 161 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 CES5AQ6NT32 575 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ZNF782Q6ZMW2 699 aaPredicted RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 ADGRG3Q86Y34 549 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 AMER2Q8N7J2 671 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 SMG7Q92540 1137 aaKnown RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 SLC6A15Q9H2J7 730 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 MUC13Q9H3R2 512 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 PDGFCQ9NRA1 345 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms