RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 SERPINA4P29622 427 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 RGRP47804 291 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 PGGT1BP53609 377 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 BCL2L1Q07817 233 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 SGCGQ13326 291 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 SEL1L3Q68CR1 1132 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 MRNIPQ6NTE8 343 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 KLC3Q6P597 504 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 CAMK1DQ8IU85 385 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 CNDP1Q96KN2 507 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 TUBGCP5Q96RT8 1024 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 POPDC3Q9HBV1 291 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 NCKIPSDQ9NZQ3 722 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 DKK3Q9UBP4 350 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 PCDH15Q96QU1 1955 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 CNOT1A5YKK6 2376 aaKnown RBP21.23■□□□□ 0.99
SGMS1-210ENST00000619438 C10orf142B7Z368 130 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 F8W8V4 182 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 WNT9AO14904 365 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 ENTPD5O75356 428 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 GJB3O75712 270 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 PAK4O96013 591 aaPredicted RBP21.23■□□□□ 0.99
SGMS1-210ENST00000619438 TFEBP19484 476 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 MPSTP25325 297 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 CPA2P48052 419 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 ZNF284Q2VY69 593 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 SLC9B1Q4ZJI4 515 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 LRRC73Q5JTD7 316 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 KIAA1161Q6NSJ0 714 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 MAPK15Q8TD08 544 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 TBATAQ96M53 351 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 NDNQ99608 321 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 MYOCQ99972 504 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 CCDC28BQ9BUN5 200 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 SLC17A9Q9BYT1 436 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 GPAMQ9HCL2 828 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 TCF7L2Q9NQB0 619 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 DNAAF2Q9NVR5 837 aaKnown RBP21.23■□□□□ 0.99
SGMS1-210ENST00000619438 MARCH4Q9P2E8 410 aaPredicted RBP21.23■□□□□ 0.99
SGMS1-210ENST00000619438 NKX1-2Q9UD57 310 aaPredicted RBP21.23■□□□□ 0.99
SGMS1-210ENST00000619438 ZFR2Q9UPR6 939 aaKnown RBP21.23■□□□□ 0.99
SGMS1-210ENST00000619438 C15orf41Q9Y2V0 281 aa21.23■□□□□ 0.99
SGMS1-210ENST00000619438 GRID2O43424 1007 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 CRTAMO95727 393 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 TIMP2P16035 220 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 ADSLP30566 484 aaPredicted RBP21.22■□□□□ 0.99
SGMS1-210ENST00000619438 AKT2P31751 481 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 ABL2P42684 1182 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 SUOXP51687 545 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 BNC1Q01954 994 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 CACNA1EQ15878 2313 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 NET1Q7Z628 596 aaPredicted RBP21.22■□□□□ 0.99
SGMS1-210ENST00000619438 FBXO27Q8NI29 283 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 BLOC1S5Q8TDH9 187 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 HCAR2Q8TDS4 363 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 VOPP1Q96AW1 172 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 DNAJC1Q96KC8 554 aaKnown RBP21.22■□□□□ 0.99
SGMS1-210ENST00000619438 IL21RQ9HBE5 538 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 NLE1Q9NVX2 485 aaPredicted RBP21.22■□□□□ 0.99
SGMS1-210ENST00000619438 KCTD3Q9Y597 815 aa21.22■□□□□ 0.99
SGMS1-210ENST00000619438 CD3EAPO15446 510 aaKnown RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 GOT2P00505 430 aaKnown RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 HNRNPA2B1P22626 353 aaKnown RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 GCKP35557 465 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 GALNT1Q10472 559 aaPredicted RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 SLC14A1Q13336 389 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 CSHL1Q14406 222 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 GALNT3Q14435 633 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 NAA25Q14CX7 972 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 TYSND1Q2T9J0 566 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 SLC22A9Q8IVM8 553 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 SCUBE1Q8IWY4 988 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 MFSD2AQ8NA29 543 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 SLC32A1Q9H598 525 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 SCUBE2Q9NQ36 999 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 INTS10Q9NVR2 710 aaKnown RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 ZDHHC2Q9UIJ5 367 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 ITM2BQ9Y287 266 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 ARL5AQ9Y689 179 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 ASCC3Q8N3C0 2202 aaKnown RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 MED19A0JLT2 244 aaPredicted RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 CCDC162PA2VCL2 907 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 IGLON5A6NGN9 336 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 TLR4O00206 839 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 WNT1P04628 370 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 CCDC166P0CW27 439 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 FDXRP22570 491 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 ZNF140P52738 457 aaPredicted RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 AP1S1P61966 158 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 POLR2LP62875 67 aaKnown RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 KPNB1Q14974 876 aaKnown RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 TRMT5Q32P41 509 aaKnown RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 KHDC1Q4VXA5 237 aaKnown RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 ERAP2Q6P179 960 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 BRAT1Q6PJG6 821 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 KIRREL3Q8IZU9 778 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 CPSF7Q8N684 471 aaKnown RBP21.21■□□□□ 0.99
SGMS1-210ENST00000619438 OR4L1Q8NH43 312 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 CXorf40AQ8TE69 158 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 FZD3Q9NPG1 666 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms