RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 PGRMC1O00264 195 aaKnown RBP11.92□□□□□ -0.5
SRRT-216ENST00000618262 PLOD3O60568 738 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 BMP1P13497 986 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 HOXB8P17481 243 aaPredicted RBP11.92□□□□□ -0.5
SRRT-216ENST00000618262 PAFAH1B1P43034 410 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 CASP9P55211 416 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 TPTEP56180 551 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 DPYSL2Q16555 572 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 RNF43Q68DV7 783 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 NANOGP8Q6NSW7 305 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 MZT2AQ6P582 158 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 SCML4Q8N228 414 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 METTL25Q8N6Q8 603 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 ANKFN1Q8N957 763 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 DNAAF3Q8N9W5 541 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 OVCA2Q8WZ82 227 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 TLCD1Q96CP7 247 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 RADILQ96JH8 1075 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 C1QTNF7Q9BXJ2 289 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 MRPS26Q9BYN8 205 aaKnown RBP11.92□□□□□ -0.5
SRRT-216ENST00000618262 HOXD1Q9GZZ0 328 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 HPF1Q9NWY4 346 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 DTX4Q9Y2E6 619 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 DBX1A6NMT0 343 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 RRP8O43159 456 aaKnown RBP11.92□□□□□ -0.5
SRRT-216ENST00000618262 HEXIM1O94992 359 aaKnown RBP11.92□□□□□ -0.5
SRRT-216ENST00000618262 TCP1P17987 556 aaKnown RBP11.92□□□□□ -0.5
SRRT-216ENST00000618262 CAPN3P20807 821 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 GDF10P55107 478 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 PPP2R5DQ14738 602 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 MMEL1Q495T6 779 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 CACHD1Q5VU97 1274 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 NCBP2-AS2Q69YL0 99 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 GTF2IRD2BQ6EKJ0 949 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 TTC27Q6P3X3 843 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 ARCQ7LC44 396 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 GSTA5Q7RTV2 222 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 NUP54Q7Z3B4 507 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 GTF2IRD2Q86UP8 949 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 C12orf40Q86WS4 652 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 ADCY4Q8NFM4 1077 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 PGAP3Q96FM1 320 aaPredicted RBP11.92□□□□□ -0.5
SRRT-216ENST00000618262 SLC29A1Q99808 456 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 C17orf62Q9BQA9 187 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 CDADC1Q9BWV3 514 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 PABPC3Q9H361 631 aaKnown RBP11.92□□□□□ -0.5
SRRT-216ENST00000618262 ANKMY1Q9P2S6 941 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 CAB39Q9Y376 341 aaPredicted RBP11.92□□□□□ -0.5
SRRT-216ENST00000618262 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
SRRT-216ENST00000618262 SDK1Q7Z5N4 2213 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 PATJQ8NI35 1801 aa11.92□□□□□ -0.5
SRRT-216ENST00000618262 TRBV23OR9-2A0A075B6M9 112 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 CBX4O00257 560 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 MBTPS2O43462 519 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 SMPD2O60906 423 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 C1RP00736 705 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 ALBP02768 609 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 POU3F3P20264 500 aaPredicted RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 GARSP41250 739 aaKnown RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 SLC6A11P48066 632 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 AP2S1P53680 142 aaPredicted RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 KCNAB2Q13303 367 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 CDH18Q13634 790 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 ACSBG2Q5FVE4 666 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 SEZ6L2Q6UXD5 910 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 TMEM184AQ6ZMB5 413 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 FRA10AC1Q70Z53 315 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 ZSWIM9Q86XI8 627 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 FAM71DQ8N9W8 422 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 OR6K2Q8NGY2 324 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 BPIFB1Q8TDL5 484 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 UBP1Q9NZI7 540 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 HAO1Q9UJM8 370 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 DOCK8Q8NF50 2099 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 TCF20Q9UGU0 1960 aaKnown RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 J3KR12 359 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 NUPL2O15504 423 aaKnown RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 PDPK1O15530 556 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 SNAP91O60641 907 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 ATG13O75143 517 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 IGLV3-27P01718 113 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 PPP3CCP48454 512 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 RPIAP49247 311 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 KCNJ10P78508 379 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 SLC7A9P82251 487 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 LIPEQ05469 1076 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 SLC45A4Q5BKX6 768 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 BRMS1LQ5PSV4 323 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 SLX4IPQ5VYV7 408 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 RHBDF2Q6PJF5 856 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 YAF2Q8IY57 180 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 CCDC105Q8IYK2 499 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 ADGRG2Q8IZP9 1017 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 PRELID2Q8N945 189 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 CATSPER1Q8NEC5 780 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 TMEM79Q9BSE2 394 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 TRIM51Q9BSJ1 452 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 MTG2Q9H4K7 406 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 POLR3BQ9NW08 1133 aaPredicted RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 ACTR3BQ9P1U1 418 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms