RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 KLQ9UEF7 1012 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 SCOCQ9UIL1 159 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 OR2AG2A6NM03 316 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 MAP3K13O43283 966 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 KLK8O60259 260 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 EFCAB14O75071 495 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 ARHGEF15O94989 841 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 IDO1P14902 403 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 PTPN2P17706 415 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 ADARP55265 1226 aaKnown RBP12.2□□□□□ -0.46
CIITA-212ENST00000618207 MRPS35P82673 323 aaKnown RBP12.2□□□□□ -0.46
CIITA-212ENST00000618207 MED21Q13503 144 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 ARSIQ5FYB1 569 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 Q6ZVL8 140 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 ADGRG6Q86SQ4 1221 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 SPPL2CQ8IUH8 684 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 SFRP1Q8N474 314 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 SDR39U1Q9NRG7 319 aaPredicted RBP12.2□□□□□ -0.46
CIITA-212ENST00000618207 NUDT4Q9NZJ9 180 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 PRKAG2Q9UGJ0 569 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 PCDHGB4Q9UN71 923 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 POLR3HQ9Y535 204 aaPredicted RBP12.2□□□□□ -0.46
CIITA-212ENST00000618207 PCDHGB5Q9Y5G0 923 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 GPR45Q9Y5Y3 372 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 LEFTY1O75610 366 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 TIPRLO75663 272 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 MTHFD1P11586 935 aaKnown RBP12.19□□□□□ -0.46
CIITA-212ENST00000618207 NCK1P16333 377 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 VCLP18206 1134 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 IL12AP29459 219 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 CCR7P32248 378 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 MAPK8P45983 427 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 ACADVLP49748 655 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 DGKQP52824 942 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 B4GALNT1Q00973 533 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 CREMQ03060 361 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 ADGRE1Q14246 886 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 CPSF6Q16630 551 aaKnown RBP eCLIP12.19□□□□□ -0.46
CIITA-212ENST00000618207 RFTN2Q52LD8 501 aaPredicted RBP12.19□□□□□ -0.46
CIITA-212ENST00000618207 TCEAL5Q5H9L2 206 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 FBXL19Q6PCT2 694 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 PHC3Q8NDX5 983 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 OR2A12Q8NGT7 310 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 CLHC1Q8NHS4 586 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 STON2Q8WXE9 905 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 YIPF3Q9GZM5 350 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 ARL15Q9NXU5 204 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 HS3ST2Q9Y278 367 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 RNF11Q9Y3C5 154 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 AP4S1Q9Y587 144 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 CCDC154A6NI56 674 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 GRXCR1A8MXD5 290 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 ZSCAN9O15535 394 aaPredicted RBP12.19□□□□□ -0.46
CIITA-212ENST00000618207 SLC22A3O75751 556 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 POP4O95707 220 aaKnown RBP12.19□□□□□ -0.46
CIITA-212ENST00000618207 LYNP07948 512 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 C1SP09871 688 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 G6PDP11413 515 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 SLC2A4P14672 509 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 RPL38P63173 70 aaKnown RBP12.19□□□□□ -0.46
CIITA-212ENST00000618207 MESP2Q0VG99 397 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 CRY1Q16526 586 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 AP5B1Q2VPB7 878 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 SAMD4BQ5PRF9 694 aaKnown RBP12.19□□□□□ -0.46
CIITA-212ENST00000618207 C6orf10Q5SRN2 563 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 RARS2Q5T160 578 aaKnown RBP12.19□□□□□ -0.46
CIITA-212ENST00000618207 GPRC6AQ5T6X5 926 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 SLC2A7Q6PXP3 512 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 BLOC1S3Q6QNY0 202 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 VRK3Q8IV63 474 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 SLC15A3Q8IY34 581 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 CANT1Q8WVQ1 401 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 PPP2R3CQ969Q6 453 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 EME1Q96AY2 570 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 VCX3BQ9H321 246 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 INTS7Q9NVH2 962 aaKnown RBP12.19□□□□□ -0.46
CIITA-212ENST00000618207 TMEM181Q9P2C4 612 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 OPTCQ9UBM4 332 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 BCAP29Q9UHQ4 241 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 SCN8AQ9UQD0 1980 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 FAM149AA5PLN7 773 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 MT-ND1P03886 318 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 NAT1P18440 290 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 POLR2EP19388 210 aaKnown RBP12.19□□□□□ -0.46
CIITA-212ENST00000618207 ATP6V1B2P21281 511 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 BMPR1AP36894 532 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 ETV3P41162 512 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 FOLH1Q04609 750 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 ILF2Q12905 390 aaKnown RBP12.19□□□□□ -0.46
CIITA-212ENST00000618207 GK3PQ14409 553 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 PTGR1Q14914 329 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 ARHGAP15Q53QZ3 475 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 ADIPOR2Q86V24 386 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 DHFR2Q86XF0 187 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 SPPL3Q8TCT6 385 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 GATA6Q92908 595 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 FOXJ1Q92949 421 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 ULK4Q96C45 1275 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 LRRC58Q96CX6 371 aa12.19□□□□□ -0.46
CIITA-212ENST00000618207 CNBD2Q96M20 576 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms