RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MED4Q9NPJ6 270 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 ACSS2Q9NR19 701 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 ZNF451Q9Y4E5 1061 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 MN1Q10571 1320 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 DNALI1O14645 258 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 MAP2K7O14733 419 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 KCNN4O15554 427 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 HNRNPRO43390 633 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 MFSD11O43934 449 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 CBX6O95503 412 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 MYBL2P10244 700 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 IL4RP24394 825 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 VARSP26640 1264 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 TEAD1P28347 426 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 VIPR1P32241 457 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 HSPA9P38646 679 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 EPHA4P54764 986 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 ADCY2Q08462 1091 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 LRP8Q14114 963 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 IL11RAQ14626 422 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 PAFAH1B3Q15102 231 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 CHRNA6Q15825 494 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 UGT8Q16880 541 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 P3H1Q32P28 736 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 SLC6A19Q695T7 634 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 IYDQ6PHW0 289 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 PLXDC1Q8IUK5 500 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 CBARPQ8N350 705 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 PQLC3Q8N755 202 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 SH3KBP1Q96B97 665 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 C9orf72Q96LT7 481 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 FAM118BQ9BPY3 351 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 STN1Q9H668 368 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 LHX9Q9NQ69 397 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 ZNF446Q9NWS9 450 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 KCTD5Q9NXV2 234 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 TBC1D29Q9UFV1 150 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 SHOC2Q9UQ13 582 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 CELSR1Q9NYQ6 3014 aa17.29■□□□□ 0.36
TRAPPC3-209ENST00000616395 C21orf140B9A014 251 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 DPM1O60762 260 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 SPAG6O75602 509 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 PECAM1P16284 738 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 LHCGRP22888 699 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 VPS41P49754 854 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 SEPHS1P49903 392 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 ITGA8P53708 1063 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 EIF3BP55884 814 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 RPS18P62269 152 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 SARNPP82979 210 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 DHX9Q08211 1270 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 TRIP13Q15645 432 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 ZRANB3Q5FWF4 1079 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 TRMT10CQ7L0Y3 403 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 HOOK3Q86VS8 718 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 GALNT13Q8IUC8 556 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 LRRC49Q8IUZ0 686 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 PPIL6Q8IXY8 311 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 KRT222Q8N1A0 295 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 LRRN4Q8WUT4 740 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 UBLCP1Q8WVY7 318 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 CINPQ9BW66 212 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 UNKQ9C0B0 810 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 ZDHHC18Q9NUE0 388 aa17.28■□□□□ 0.36
TRAPPC3-209ENST00000616395 TTC24A2A3L6 582 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 SOD1P00441 154 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 GPR1P46091 355 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 SCNN1BP51168 640 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 PTPRRQ15256 657 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 NCBP2-AS2Q69YL0 99 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 RFLNAQ6ZTI6 216 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 SLC9B2Q86UD5 537 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 RBMXL3Q8N7X1 1067 aaKnown RBP17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 FAM71DQ8N9W8 422 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 CCNYQ8ND76 341 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 FBXO25Q8TCJ0 367 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 SNRNP40Q96DI7 357 aaKnown RBP17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 PPP1R2P1Q96PQ5 205 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 QKIQ96PU8 341 aaKnown RBP eCLIP17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 PHACTR1Q9C0D0 580 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 EPB41L1Q9H4G0 881 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 HAUS2Q9NVX0 235 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 GRHL1Q9NZI5 618 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 SAE1Q9UBE0 346 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 PRKAB1Q9Y478 270 aa17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 PCYT1BQ9Y5K3 369 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC3-209ENST00000616395 PDZD2O15018 2839 aa17.27■□□□□ 0.35
TRAPPC3-209ENST00000616395 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 TIAF1O95411 115 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 C9P02748 559 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 MT-ND3P03897 115 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 FGF5P12034 268 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 IL10RBQ08334 325 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 NSUN2Q08J23 767 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 IFFO1Q0D2I5 559 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 SLC10A7Q0GE19 358 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 IL10RAQ13651 578 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 NPNTQ6UXI9 565 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 LRIG3Q6UXM1 1119 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms