RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 JRKLQ9Y4A0 524 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 SPAG6O75602 509 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 PSMB4P28070 264 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 GNG11P61952 73 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 LDLRAP1Q5SW96 308 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 DARS2Q6PI48 645 aaKnown RBP18.54■□□□□ 0.56
CDX1-202ENST00000616154 AMZ2Q86W34 360 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 PPP1R3BQ86XI6 285 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 RASGEF1AQ8N9B8 481 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 DDHD1Q8NEL9 900 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 GPR150Q8NGU9 434 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 UBXN4Q92575 508 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 FAM118BQ9BPY3 351 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 TLR10Q9BXR5 811 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 SMOXQ9NWM0 555 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 LNPEPQ9UIQ6 1025 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 PCDHGA6Q9Y5G7 932 aa18.54■□□□□ 0.56
CDX1-202ENST00000616154 DNMT3AQ9Y6K1 912 aaPredicted RBP18.54■□□□□ 0.56
CDX1-202ENST00000616154 F5H423 210 aaPredicted RBP18.53■□□□□ 0.56
CDX1-202ENST00000616154 GAPDHSO14556 408 aaPredicted RBP18.53■□□□□ 0.56
CDX1-202ENST00000616154 POP7O75817 140 aaKnown RBP18.53■□□□□ 0.56
CDX1-202ENST00000616154 MT-ND3P03897 115 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 CCNYL3P0C7X3 344 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 CTSCP53634 463 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 PPP1CAP62136 330 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 SRSF1Q07955 248 aaKnown RBP eCLIP18.53■□□□□ 0.56
CDX1-202ENST00000616154 CHRNA6Q15825 494 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 KCTD11Q693B1 232 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 FAM151BQ6UXP7 276 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 GLT6D1Q7Z4J2 308 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 SLC25A41Q8N5S1 370 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 CCDC110Q8TBZ0 833 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 SLC41A2Q96JW4 573 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 PDE7BQ9NP56 450 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 FEZ2Q9UHY8 353 aaPredicted RBP18.53■□□□□ 0.56
CDX1-202ENST00000616154 POLHQ9Y253 713 aa18.53■□□□□ 0.56
CDX1-202ENST00000616154 GLYATL1P3A0A0U1RQE8 302 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 KIF2AO00139 706 aaPredicted RBP18.52■□□□□ 0.56
CDX1-202ENST00000616154 GPR39O43194 453 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 RECKO95980 971 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 AGTP01019 485 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 FURINP09958 794 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 DNASE1L3Q13609 305 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 ITGA9Q13797 1035 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 ERV3-1Q14264 604 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 PRPSAP1Q14558 356 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 RPE65Q16518 533 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 GPRC6AQ5T6X5 926 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 DENND5AQ6IQ26 1287 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 KLHL35Q6PF15 583 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 FAM83HQ6ZRV2 1179 aaPredicted RBP18.52■□□□□ 0.56
CDX1-202ENST00000616154 BLOC1S5Q8TDH9 187 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 FCRL4Q96PJ5 515 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 FICDQ9BVA6 458 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 FRMD8P1Q9BZ68 369 aaPredicted RBP18.52■□□□□ 0.56
CDX1-202ENST00000616154 PADI1Q9ULC6 663 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 TP53TG5Q9Y2B4 290 aa18.52■□□□□ 0.56
CDX1-202ENST00000616154 R3HDM2Q9Y2K5 976 aaKnown RBP18.52■□□□□ 0.56
CDX1-202ENST00000616154 IGHV5-51A0A0C4DH38 117 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 TCRBV7S2A1N4TA0A589 114 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 MKRN2OSH3BPM6 223 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 UGT1A9O60656 530 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 KATNA1O75449 491 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 CREG1O75629 220 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 TIAF1O95411 115 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 UGT1A6P19224 532 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 UGT1A1P22309 533 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 UGT1A4P22310 534 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 CA5AP35218 305 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 KLRB1Q12918 225 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 TUBB3Q13509 450 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 TAF1AQ15573 450 aaPredicted RBP18.51■□□□□ 0.55
CDX1-202ENST00000616154 IGFBP7Q16270 282 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 PARP6Q2NL67 630 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 TCTN3Q6NUS6 607 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 TMEM220Q6QAJ8 160 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 BPHLQ86WA6 291 aaPredicted RBP18.51■□□□□ 0.55
CDX1-202ENST00000616154 SIDT2Q8NBJ9 832 aaKnown RBP18.51■□□□□ 0.55
CDX1-202ENST00000616154 CT55Q8WUE5 264 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 C16orf45Q96MC5 204 aaPredicted RBP18.51■□□□□ 0.55
CDX1-202ENST00000616154 UGT1A7Q9HAW7 530 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 UGT1A10Q9HAW8 530 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 UGT1A8Q9HAW9 530 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 LHX9Q9NQ69 397 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 RARRES3Q9UL19 164 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 PKP3Q9Y446 797 aa18.51■□□□□ 0.55
CDX1-202ENST00000616154 CDC14CA4D256 554 aa18.5■□□□□ 0.55
CDX1-202ENST00000616154 CLEC18AA5D8T8 446 aa18.5■□□□□ 0.55
CDX1-202ENST00000616154 AGAP14A8MT82 685 aa18.5■□□□□ 0.55
CDX1-202ENST00000616154 C21orf140B9A014 251 aa18.5■□□□□ 0.55
CDX1-202ENST00000616154 MTHFD1P11586 935 aaKnown RBP18.5■□□□□ 0.55
CDX1-202ENST00000616154 FOLR1P15328 257 aa18.5■□□□□ 0.55
CDX1-202ENST00000616154 UBAP2LQ14157 1087 aaKnown RBP18.5■□□□□ 0.55
CDX1-202ENST00000616154 NFE2L1Q14494 772 aa18.5■□□□□ 0.55
CDX1-202ENST00000616154 OASLQ15646 514 aaKnown RBP18.5■□□□□ 0.55
CDX1-202ENST00000616154 PAPD7Q5XG87 772 aaKnown RBP18.5■□□□□ 0.55
CDX1-202ENST00000616154 METRNLQ641Q3 311 aa18.5■□□□□ 0.55
CDX1-202ENST00000616154 PWWP2BQ6NUJ5 590 aa18.5■□□□□ 0.55
CDX1-202ENST00000616154 CLEC18BQ6UXF7 455 aa18.5■□□□□ 0.55
CDX1-202ENST00000616154 KMT5CQ86Y97 462 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms