RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 FEM1CQ96JP0 617 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 ERMAPQ96PL5 475 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 KAT8Q9H7Z6 458 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 C1orf109Q9NX04 203 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 DNAJB9Q9UBS3 223 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 CXorf57Q6NSI4 855 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 SATL1Q86VE3 508 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 PACRGLQ8N7B6 248 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 C9orf43Q8TAL5 461 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 C8orf48Q96LL4 319 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 NKIRAS2Q9NYR9 191 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 BAZ2BQ9UIF8 2168 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 VIPP01282 170 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 SDHAF4Q5VUM1 108 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 ADNP2Q6IQ32 1131 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 RGMBQ6NW40 437 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 TTC29Q8NA56 475 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 SNX33Q8WV41 574 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 XAGE5Q8WWM1 108 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 FZD10Q9ULW2 581 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 ZNF99A8MXY4 864 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 PRAMEF1O95521 474 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 RAP2AP10114 183 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 IDH3AP50213 366 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 LDLRAP1Q5SW96 308 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 AHSA2Q719I0 299 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 ZNF572Q7Z3I7 529 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 GALNT13Q8IUC8 556 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 DNASE1L2Q92874 299 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 KIF1AQ12756 1690 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 FAM234BA2RU67 622 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 C2orf71A6NGG8 1288 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 AQP12BA6NM10 295 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 RNF225M0QZC1 329 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 FAM163BP0C2L3 166 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 NAE1Q13564 534 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 AQP12AQ8IXF9 295 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 GPR65Q8IYL9 337 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 BANPQ8N9N5 519 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 TSEN15Q8WW01 171 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 SNX27Q96L92 541 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 CAMK1GQ96NX5 476 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 SLC4A9Q96Q91 983 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 PLK2Q9NYY3 685 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 C2CD4BA6NLJ0 364 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 TSPAN1O60635 241 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 PAPSS2O95340 614 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 RNASE12Q5GAN4 147 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 FAM91A1Q658Y4 838 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 CHST9Q7L1S5 443 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 RALGPS2Q86X27 583 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 TBC1D24Q9ULP9 559 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 PCDHGB7Q9Y5F8 929 aa17.19■□□□□ 0.34
HMGXB3-206ENST00000613459 PIAS1O75925 651 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 SLC35G6P0C7Q6 338 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 MSX2P35548 267 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 PIK3CBP42338 1070 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 B3GNT5Q9BYG0 378 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 BRINP2Q9C0B6 783 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 COMMD4Q9H0A8 199 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 STXBP5LQ9Y2K9 1186 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 PTPRJQ12913 1337 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 CXCR6O00574 342 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TFPIP10646 304 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 PEX2P28328 305 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 DNASE1L1P49184 302 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 DUSP4Q13115 394 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TSC22D1Q15714 1073 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 CPNE9Q8IYJ1 553 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TAMM41Q96BW9 452 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 MGME1Q9BQP7 344 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 ABCG8Q9H221 673 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 MSI1O43347 362 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 VARSP26640 1264 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 NSG1P42857 185 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 EEFSECP57772 596 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 NOGQ13253 232 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 POM121L1PQ3SYA9 428 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 FSTL4Q6MZW2 842 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 PAMR1Q6UXH9 720 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 ANKS1BQ7Z6G8 1248 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 SLITRK4Q8IW52 837 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 CLHC1Q8NHS4 586 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 ZNF599Q96NL3 588 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 LENG8Q96PV6 779 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 GPER1Q99527 375 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 CNPPD1Q9BV87 410 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 CADM1Q9BY67 442 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TBC1D3DA0A087WVF3 549 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TBC1D3IA0A087WXS9 549 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TBC1D3EA0A087X179 549 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TBC1D3KA0A087X1G2 549 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 METTL21EPA6NDL7 271 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TBC1D3FA6NER0 549 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TBC1D3LB9A6J9 549 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 ZNF432O94892 652 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TBC1D3HP0C7X1 549 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 CYP4F8P98187 520 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 CNPY1Q3B7I2 92 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TBC1D3GQ6DHY5 549 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms