RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 ADGRD1Q6QNK2 874 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 GPER1Q99527 375 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 ANKHQ9HCJ1 492 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 PARP4Q9UKK3 1724 aaKnown RBP19.91■□□□□ 0.78
CTDP1-208ENST00000613122 ELOVL7A1L3X0 281 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 PRKCGP05129 697 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 AGXTP21549 392 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 TCEA1P23193 301 aaKnown RBP19.91■□□□□ 0.78
CTDP1-208ENST00000613122 GPR33Q49SQ1 333 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 SYPL2Q5VXT5 272 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 ZNF776Q68DI1 518 aaPredicted RBP19.91■□□□□ 0.78
CTDP1-208ENST00000613122 TRPV3Q8NET8 790 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 RIOK2Q9BVS4 552 aaKnown RBP19.91■□□□□ 0.78
CTDP1-208ENST00000613122 OSBPL11Q9BXB4 747 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 BTBD1Q9H0C5 482 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 HMGXB4Q9UGU5 601 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 IQCMA0A1B0GVH7 501 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 UBE2QL1A1L167 161 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 PCSK2P16519 638 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 MLLT3P42568 568 aaPredicted RBP19.91■□□□□ 0.78
CTDP1-208ENST00000613122 SLC11A1P49279 550 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 COL9A3Q14050 684 aaPredicted RBP19.91■□□□□ 0.78
CTDP1-208ENST00000613122 FAM92BQ6ZTR7 304 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 C11orf65Q8NCR3 313 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 AP3S1Q92572 193 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 TRNT1Q96Q11 434 aaKnown RBP19.91■□□□□ 0.78
CTDP1-208ENST00000613122 CDH7Q9ULB5 785 aa19.91■□□□□ 0.78
CTDP1-208ENST00000613122 C9J4A7 227 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 UGT2B11O75310 529 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 KRT36O76013 467 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 DBTP11182 482 aaKnown RBP19.9■□□□□ 0.78
CTDP1-208ENST00000613122 KCNA5P22460 613 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 SLC1A5Q15758 541 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 KIAA0930Q6ICG6 404 aaPredicted RBP19.9■□□□□ 0.78
CTDP1-208ENST00000613122 RASGRP3Q8IV61 690 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 WRAP73Q9P2S5 460 aaPredicted RBP19.9■□□□□ 0.78
CTDP1-208ENST00000613122 CDC14AQ9UNH5 594 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 CASP9P55211 416 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 ZNF792Q3KQV3 632 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 GRASPQ7Z6J2 395 aaPredicted RBP19.9■□□□□ 0.78
CTDP1-208ENST00000613122 CRYBG2Q8N1P7 616 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 TTLQ8NG68 377 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 SLC38A4Q969I6 547 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 FCRL4Q96PJ5 515 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 IL12RB1P42701 662 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 LIN54Q6MZP7 749 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 BRAT1Q6PJG6 821 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 TMPRSS11AQ6ZMR5 421 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 DAW1Q8N136 415 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 COX18Q8N8Q8 333 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 SUN3Q8TAQ9 357 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 FCRL5Q96RD9 977 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 MIPEPQ99797 713 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 PDP1Q9P0J1 537 aaPredicted RBP19.9■□□□□ 0.78
CTDP1-208ENST00000613122 CASRP41180 1078 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 TEAD2Q15562 447 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 ARL13AQ5H913 290 aaPredicted RBP19.9■□□□□ 0.78
CTDP1-208ENST00000613122 NID2Q14112 1375 aa19.9■□□□□ 0.78
CTDP1-208ENST00000613122 PDK3Q15120 406 aa19.89■□□□□ 0.78
CTDP1-208ENST00000613122 SNAPC1Q16533 368 aa19.89■□□□□ 0.78
CTDP1-208ENST00000613122 FBXL22Q6P050 247 aa19.89■□□□□ 0.78
CTDP1-208ENST00000613122 FUKQ8N0W3 1084 aa19.89■□□□□ 0.78
CTDP1-208ENST00000613122 RIIAD1A6NNX1 92 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 TP73O15350 636 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 PDPK1O15530 556 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 PYDC2Q56P42 97 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 ZSCAN5AQ9BUG6 496 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 COMMD9Q9P000 198 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 LSM3P62310 102 aaKnown RBP19.89■□□□□ 0.77
CTDP1-208ENST00000613122 DCST1Q5T197 706 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 TMEM138Q9NPI0 162 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 ZDHHC3Q9NYG2 299 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 PCDHB11Q9Y5F2 797 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 MTHFRP42898 656 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 PSMD7P51665 324 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 CAMK1Q14012 370 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 FASTKD3Q14CZ7 662 aaKnown RBP19.89■□□□□ 0.77
CTDP1-208ENST00000613122 SH3PXD2AQ5TCZ1 1133 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 SLC35G5Q96KT7 338 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 OSBPL2Q9H1P3 480 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 MUC13Q9H3R2 512 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 SLC35C2Q9NQQ7 365 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 FBXL12Q9NXK8 326 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 TNFRSF11BO00300 401 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 IDH3BO43837 385 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 CHRNA1P02708 482 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 FSTL1Q12841 308 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 ABHD13Q7L211 337 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 SLC34A3Q8N130 599 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 ZHX1-C8orf76Q96EF9 292 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 SCML2Q9UQR0 700 aa19.89■□□□□ 0.77
CTDP1-208ENST00000613122 RUVBL1Q9Y265 456 aaKnown RBP19.89■□□□□ 0.77
CTDP1-208ENST00000613122 PSMD11O00231 422 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 RB1P06400 928 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 LYNP07948 512 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 CAPGP40121 348 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 CCR8P51685 355 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 SPPL2CQ8IUH8 684 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 NEUROD4Q9HD90 331 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 PNPLA3Q9NST1 481 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms