RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 CHRAC1Q9NRG0 131 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 HMGXB4Q9UGU5 601 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 NOCTQ9UK39 431 aaKnown RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PRPF19Q9UMS4 504 aaKnown RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 C2orf72A6NCS6 295 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 OR6C75A6NL08 312 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 H3BNH8 94 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC9A3R1O14745 358 aaPredicted RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC2A1P11166 492 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 PBX3P40426 434 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 FBXO48Q5FWF7 155 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 ANKRD22Q5VYY1 191 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 LIN54Q6MZP7 749 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 RHBDF2Q6PJF5 856 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 NLGN4YQ8NFZ3 816 aaPredicted RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 SPATA22Q8NHS9 363 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 DNAJB14Q8TBM8 379 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 DPYSL5Q9BPU6 564 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 ATP13A3Q9H7F0 1226 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 SPATA6Q9NWH7 488 aaPredicted RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 VWA7Q9Y334 891 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 GRIP1Q9Y3R0 1128 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 GSC2O15499 205 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 IFNA6P05013 189 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 CD40LGP29965 261 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 NRF1Q16656 503 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 C5orf22Q49AR2 442 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 PRICKLE2Q7Z3G6 844 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 MAGEC3Q8TD91 643 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 EFHD2Q96C19 240 aaPredicted RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 PPP1R16AQ96I34 528 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 FEM1AQ9BSK4 669 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 BRD7Q9NPI1 651 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 CRTAC1Q9NQ79 661 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 STXBP5LQ9Y2K9 1186 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 TRIM24O15164 1050 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 DUSP11O75319 330 aaKnown RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 COL6A2P12110 1019 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 MAT2AP31153 395 aaKnown RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 HPCAL1P37235 193 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 TEX44Q53QW1 395 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 AADACL4Q5VUY2 407 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 IFNL1Q8IU54 200 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 ANKK1Q8NFD2 765 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 C1orf50Q9BV19 199 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 TMEM121BQ9BXQ6 578 aaPredicted RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 ALG2Q9H553 416 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 GNPTGQ9UJJ9 305 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 ZNF222Q9UK12 451 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 COL1A1P02452 1464 aaPredicted RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 MYH2Q9UKX2 1941 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 BCLAF3A2AJT9 711 aaKnown RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 H3BM21 787 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC28A1O00337 649 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 PLD2O14939 933 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 ADH1AP07327 375 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 HSF2Q03933 536 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 STEAP3Q658P3 488 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 NOXRED1Q6NXP6 359 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 ARMC10Q8N2F6 343 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 OR14C36Q8NHC7 312 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 FAXDC2Q96IV6 333 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 EPB41L1Q9H4G0 881 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 AGO3Q9H9G7 860 aaKnown RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 SIX2Q9NPC8 291 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 SPATA7Q9P0W8 599 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 COPS7AQ9UBW8 275 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 COQ4Q9Y3A0 265 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 TEX46H3BTG2 121 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 MSX2P35548 267 aaPredicted RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 CREB5Q02930 508 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 QPCTQ16769 361 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 CXXC5Q7LFL8 322 aaKnown RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 PLCZ1Q86YW0 608 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 TTC29Q8NA56 475 aaPredicted RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 TSEN15Q8WW01 171 aaKnown RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 JPH3Q8WXH2 748 aaPredicted RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 SPOCK2Q92563 424 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 ZNF516Q92618 1163 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 B3GALT6Q96L58 329 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 A0A0G2JPF8 293 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 HNRNPCL3B7ZW38 293 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 PMM2O15305 246 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 MED26O95402 600 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 HNRNPCL4P0DMR1 293 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 LPOP22079 712 aaPredicted RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 GRK5P34947 590 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 LSM3P62310 102 aaKnown RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 PRKCZQ05513 592 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 CPSF6Q16630 551 aaKnown RBP eCLIP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 FIP1L1Q6UN15 594 aaKnown RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 ZNF276Q8N554 614 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 PIK3C3Q8NEB9 887 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 DQX1Q8TE96 717 aaKnown RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 NTPCRQ9BSD7 190 aaKnown RBP9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 HIPK2Q9H2X6 1198 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 MUC13Q9H3R2 512 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 REEP1Q9H902 201 aa9.36□□□□□ -0.91
SRGAP2B-204ENST00000612199 TXNRD2Q9NNW7 524 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms