RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ARHGEF7Q14155 803 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 RCAN2Q14206 197 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 HABP4Q5JVS0 413 aaKnown RBP13.39□□□□□ -0.27
NEK3-205ENST00000610828 MBOAT1Q6ZNC8 495 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 DET1Q7L5Y6 550 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 GRASPQ7Z6J2 395 aaPredicted RBP13.39□□□□□ -0.27
NEK3-205ENST00000610828 RHBDF1Q96CC6 855 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 LRRC58Q96CX6 371 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 KCTD5Q9NXV2 234 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 OPTCQ9UBM4 332 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 A0A1W2PP18 115 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 A6NHS1 94 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 CCDC154A6NI56 674 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 FXYD1O00168 92 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 TXNDC9O14530 226 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 RNASEH2AO75792 299 aaKnown RBP13.38□□□□□ -0.27
NEK3-205ENST00000610828 C8BP07358 591 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 HSPA8P11142 646 aaKnown RBP13.38□□□□□ -0.27
NEK3-205ENST00000610828 CASP2P42575 452 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 RHDQ02161 417 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 GRIK2Q13002 908 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 ABRAXAS2Q15018 415 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 NR6A1Q15406 480 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 TMEM240Q5SV17 173 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 SULT1C3Q6IMI6 304 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 PRMT9Q6P2P2 845 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 DHFR2Q86XF0 187 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 SFRP1Q8N474 314 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 MINDY1Q8N5J2 469 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 ZNF557Q8N988 423 aaPredicted RBP13.38□□□□□ -0.27
NEK3-205ENST00000610828 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
NEK3-205ENST00000610828 DCUN1D1Q96GG9 259 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 TMEM79Q9BSE2 394 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 SPATA16Q9BXB7 569 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 CD244Q9BZW8 370 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 SLC52A3Q9NQ40 469 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 SUN2Q9UH99 717 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 ERVW-1Q9UQF0 538 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 AP4S1Q9Y587 144 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 ST14Q9Y5Y6 855 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 XYLBO75191 536 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 OR56A5P0C7T3 313 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 AKT1P31749 480 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 CCR7P32248 378 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 POLR2JP52435 117 aaKnown RBP13.38□□□□□ -0.27
NEK3-205ENST00000610828 YBX1P67809 324 aaKnown RBP13.38□□□□□ -0.27
NEK3-205ENST00000610828 HSPA14Q0VDF9 509 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 NFYCQ13952 458 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 DMC1Q14565 340 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 PDCD4Q53EL6 469 aaKnown RBP13.38□□□□□ -0.27
NEK3-205ENST00000610828 COQ5Q5HYK3 327 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 ZDHHC20Q5W0Z9 365 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 TMEM126BQ8IUX1 230 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 SLC15A3Q8IY34 581 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 AHI1Q8N157 1196 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 SKA2Q8WVK7 121 aaPredicted RBP13.38□□□□□ -0.27
NEK3-205ENST00000610828 ULK4Q96C45 1275 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 TRIM8Q9BZR9 551 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 PKD2L2Q9NZM6 624 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 ABCD2Q9UBJ2 740 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 MBD1Q9UIS9 605 aaPredicted RBP13.38□□□□□ -0.27
NEK3-205ENST00000610828 PLXNB3Q9ULL4 1909 aa13.38□□□□□ -0.27
NEK3-205ENST00000610828 A0A1W2PQ67 120 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 TTC34A8MYJ7 566 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 FFAR3O14843 346 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 GPR42O15529 346 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 RNASEH1O60930 286 aaKnown RBP13.37□□□□□ -0.27
NEK3-205ENST00000610828 LEFTY1O75610 366 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 LYNP07948 512 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 ZCCHC18P0CG32 403 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 SLC6A2P23975 617 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 NNMTP40261 264 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 ZFP36L2P47974 494 aaKnown RBP13.37□□□□□ -0.27
NEK3-205ENST00000610828 PIK3CGP48736 1102 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 CRY1Q16526 586 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 TIGD2Q4W5G0 525 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 PAGE3Q5JUK9 113 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 CAPRIN2Q6IMN6 1127 aaKnown RBP13.37□□□□□ -0.27
NEK3-205ENST00000610828 BRAT1Q6PJG6 821 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 DNAJB14Q8TBM8 379 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 PROKR1Q8TCW9 393 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 TSPEARQ8WU66 669 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 HEPHQ9BQS7 1158 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 NOTCH4Q99466 2003 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 ASPDHA6ND91 283 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 WASH3PC4AMC7 463 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 K7EPI3 171 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 PER2O15055 1255 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 LSM1O15116 133 aaKnown RBP13.37□□□□□ -0.27
NEK3-205ENST00000610828 MTX2O75431 263 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 CBSLP0DN79 551 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 CBSP35520 551 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 GRIA3P42263 894 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 RPIAP49247 311 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 MRPL19P49406 292 aaKnown RBP13.37□□□□□ -0.27
NEK3-205ENST00000610828 FOLH1Q04609 750 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 AP5B1Q2VPB7 878 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 ARSIQ5FYB1 569 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 PRSS36Q5K4E3 855 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 RTL10Q7L3V2 364 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms