RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CBWD3Q5JTY5 395 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 CAPRIN2Q6IMN6 1127 aaKnown RBP4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 FAM171BQ6P995 826 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 SPSB3Q6PJ21 355 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 FAM43BQ6ZT52 329 aaPredicted RBP4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 C18orf65Q6ZTR6 163 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 DENND5BQ6ZUT9 1274 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 PLPPR4Q7Z2D5 763 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 CNPY4Q8N129 248 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 OR10S1Q8NGN2 331 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 SECTM1Q8WVN6 248 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 SORCS1Q8WY21 1168 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 SEMA4DQ92854 862 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 LINGO1Q96FE5 620 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 OXNAD1Q96HP4 312 aaPredicted RBP4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 ZNF582Q96NG8 517 aaPredicted RBP4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 OR6C1Q96RD1 312 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 MOV10L1Q9BXT6 1211 aaKnown RBP4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 GOLPH3LQ9H4A5 285 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 FKRPQ9H9S5 495 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 KLHL1Q9NR64 748 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 ZNF541Q9H0D2 1346 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 KAT6BQ8WYB5 2073 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 PRAC2D3DTV9 90 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 SNRNP70P08621 437 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 KRT19P08727 400 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 MYBL1P10243 752 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 EEF1DP29692 281 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 AHRP35869 848 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 CCR3P51677 355 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 PPP5CP53041 499 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 TERF1P54274 439 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 MLLT10P55197 1068 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 CDK3Q00526 305 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 NR1D2Q14995 579 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 GCNT6Q5T4J0 391 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 STXBP5Q5T5C0 1151 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 FIGLAQ6QHK4 219 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 CAMKMTQ7Z624 323 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 TMEM173Q86WV6 379 aaPredicted RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 TC2NQ8N9U0 490 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 TDRD5Q8NAT2 981 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 CFAP61Q8NHU2 1237 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 ZFAND2BQ8WV99 257 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 TEKT4Q8WW24 435 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 SMPDL3BQ92485 455 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 SPACA9Q96E40 222 aaPredicted RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 RADILQ96JH8 1075 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 ZNF830Q96NB3 372 aaPredicted RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 BAG1Q99933 345 aaPredicted RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 POLR3CQ9BUI4 534 aaPredicted RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 RETREG1Q9H6L5 497 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 SLA2Q9H6Q3 261 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 EVA1AQ9H8M9 152 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 TRPC7Q9HCX4 862 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 CCDC177Q9NQR7 707 aaPredicted RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 MBNL1Q9NR56 388 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 MIOSQ9NXC5 875 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 HAO2Q9NYQ3 351 aa4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 DDX25Q9UHL0 483 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-213ENST00000609587 TAF1P21675 1872 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 PRSS51A0A1B0GVH4 220 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 SMTNL1A8MU46 457 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 DVL1O14640 695 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 XRCC3O43542 346 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 GPR137BO60478 399 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 GCNT3O95395 438 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 GGPS1O95749 300 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 TRUB2O95900 331 aaKnown RBP4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 LDLRP01130 860 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 TFAP2AP05549 437 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 APOA4P06727 396 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 PFKFB1P16118 471 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 CPT2P23786 658 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 PSMC4P43686 418 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 ZNF132P52740 706 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 TROAPQ12815 778 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 CRY2Q49AN0 593 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 TCP11X2Q5H9J9 407 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 NDUFAF5Q5TEU4 345 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 C6orf163Q5TEZ5 329 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 KRT80Q6KB66 452 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 PLXDC2Q6UX71 529 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 PACS1Q6VY07 963 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 SLC9B2Q86UD5 537 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 EXOC3L1Q86VI1 746 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 PTOV1Q86YD1 416 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 DCP1BQ8IZD4 617 aaKnown RBP4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 NAGSQ8N159 534 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 PAPD5Q8NDF8 572 aaKnown RBP4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 OR2AJ1Q8NGZ0 328 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 SPATA20Q8TB22 786 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 SECISBP2LQ93073 1101 aaKnown RBP4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 MTERF3Q96E29 417 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 ABHD8Q96I13 439 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 MS4A10Q96PG2 267 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 OLFM1Q99784 485 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 C16orf70Q9BSU1 422 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 AP1M1Q9BXS5 423 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 OR10A4Q9H209 315 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms