RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CDKL2Q92772 493 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 TMEM159Q96B96 161 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 WWP1Q9H0M0 922 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 FBXO6Q9NRD1 293 aaPredicted RBP13.97□□□□□ -0.17
CTSA-219ENST00000607841 ZFATQ9P243 1243 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 PSMD13Q9UNM6 376 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 WDR37Q9Y2I8 494 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 HEBP2Q9Y5Z4 205 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 MYLKQ15746 1914 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 IQCF5A8MTL0 148 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 E5RI56 91 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 PPM1DO15297 605 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 OPA1O60313 960 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 SPAG6O75602 509 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 APOA4P06727 396 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 RHOXF2BP0C7M4 288 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 PKMP14618 531 aaKnown RBP13.96□□□□□ -0.17
CTSA-219ENST00000607841 ITGB6P18564 788 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 CHRM3P20309 590 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 SLC19A1P41440 591 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 LEPRP48357 1165 aaKnown RBP13.96□□□□□ -0.17
CTSA-219ENST00000607841 UBE2IP63279 158 aaKnown RBP13.96□□□□□ -0.17
CTSA-219ENST00000607841 ILF2Q12905 390 aaKnown RBP13.96□□□□□ -0.17
CTSA-219ENST00000607841 BOP1Q14137 746 aaKnown RBP13.96□□□□□ -0.17
CTSA-219ENST00000607841 KRT33BQ14525 404 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 NR1D2Q14995 579 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 CLCA4Q14CN2 919 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 RPE65Q16518 533 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 PERM1Q5SV97 790 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.96□□□□□ -0.17
CTSA-219ENST00000607841 TEDDM1Q5T9Z0 273 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 C3orf62Q6ZUJ4 267 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 CYS1Q717R9 158 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 OTOAQ7RTW8 1153 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 GALNT7Q86SF2 657 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 GALNT15Q8N3T1 639 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 ZFPM2Q8WW38 1151 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 C12orf66Q96MD2 445 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 BIRC8Q96P09 236 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 FMO2Q99518 471 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 RHOXF2Q9BQY4 288 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 UCK1Q9HA47 277 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 PLAC1Q9HBJ0 212 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 NSMCE4AQ9NXX6 385 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 MOCS1Q9NZB8 636 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 SCHIP1Q9P0W5 487 aaPredicted RBP13.96□□□□□ -0.17
CTSA-219ENST00000607841 ZNF624Q9P2J8 865 aaPredicted RBP13.96□□□□□ -0.17
CTSA-219ENST00000607841 COLEC10Q9Y6Z7 277 aa13.96□□□□□ -0.17
CTSA-219ENST00000607841 BPTFQ12830 3046 aa13.96□□□□□ -0.18
CTSA-219ENST00000607841 TDRD6O60522 2096 aaKnown RBP13.95□□□□□ -0.18
CTSA-219ENST00000607841 SLC5A10A0PJK1 596 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 OR52A4PA6NMU1 304 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 TCEA3O75764 348 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 HAUS5O94927 633 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 MTHFD1P11586 935 aaKnown RBP13.95□□□□□ -0.18
CTSA-219ENST00000607841 AOAHP28039 575 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 NDUFS1P28331 727 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 ALDH4A1P30038 563 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 SSTR1P30872 391 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 CCR7P32248 378 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 GPLD1P80108 840 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 MPP1Q00013 466 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 HSPA14Q0VDF9 509 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 FOXC1Q12948 553 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 ZNF658BQ4V348 819 aaPredicted RBP13.95□□□□□ -0.18
CTSA-219ENST00000607841 CTSL3PQ5NE16 218 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 CAPRIN2Q6IMN6 1127 aaKnown RBP13.95□□□□□ -0.18
CTSA-219ENST00000607841 TRMT10BQ6PF06 316 aaKnown RBP13.95□□□□□ -0.18
CTSA-219ENST00000607841 CAPN12Q6ZSI9 719 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 RAB44Q7Z6P3 723 aaPredicted RBP13.95□□□□□ -0.18
CTSA-219ENST00000607841 SLC26A11Q86WA9 606 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 TMPRSS12Q86WS5 348 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 RELL1Q8IUW5 271 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 KRT222Q8N1A0 295 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 LILRA3Q8N6C8 439 aaPredicted RBP13.95□□□□□ -0.18
CTSA-219ENST00000607841 Q8N9G6 341 aaPredicted RBP13.95□□□□□ -0.18
CTSA-219ENST00000607841 C9orf72Q96LT7 481 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 INSM2Q96T92 566 aaPredicted RBP13.95□□□□□ -0.18
CTSA-219ENST00000607841 OR52A5Q9H2C5 316 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 LRRN3Q9H3W5 708 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 EPB41L1Q9H4G0 881 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 IMP3Q9NV31 184 aaKnown RBP13.95□□□□□ -0.18
CTSA-219ENST00000607841 KCNK4Q9NYG8 393 aa13.95□□□□□ -0.18
CTSA-219ENST00000607841 SLU7O95391 586 aaKnown RBP13.94□□□□□ -0.18
CTSA-219ENST00000607841 AHSGP02765 367 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 RPLP0P05388 317 aaKnown RBP13.94□□□□□ -0.18
CTSA-219ENST00000607841 ADRB1P08588 477 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 STX2P32856 288 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 PHBP35232 272 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 PREPP48147 710 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 EPHA4P54764 986 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 INSM1Q01101 510 aaPredicted RBP13.94□□□□□ -0.18
CTSA-219ENST00000607841 SPIDRQ14159 915 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 BRD3Q15059 726 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 CLPPQ16740 277 aaPredicted RBP13.94□□□□□ -0.18
CTSA-219ENST00000607841 TTLL9Q3SXZ7 439 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 ZNF789Q5FWF6 425 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 PLEKHS1Q5SXH7 462 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 TEX35Q5T0J7 233 aa13.94□□□□□ -0.18
CTSA-219ENST00000607841 UGT3A1Q6NUS8 523 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms