RNA–Protein interactions for RNA: ENST00000607316.2

TMEM259-212, Transcript of transmembrane protein 259, humanhuman

TSL 2

Gene TMEM259, Length 477 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-212ENST00000607316 TBC1D25Q3MII6 688 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 MSS51Q4VC12 460 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 JAMLQ86YT9 394 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 SPNS2Q8IVW8 549 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 PPIL6Q8IXY8 311 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 KRT222Q8N1A0 295 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 FBXO39Q8N4B4 442 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 OTUD6BQ8N6M0 293 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 OR4D9Q8NGE8 314 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 HEXDCQ8WVB3 486 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 PEX13Q92968 403 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.33□□□□□ -0.28
TMEM259-212ENST00000607316 SH3KBP1Q96B97 665 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 ZNF669Q96BR6 464 aaPredicted RBP13.33□□□□□ -0.28
TMEM259-212ENST00000607316 NAF1Q96HR8 494 aaKnown RBP13.33□□□□□ -0.28
TMEM259-212ENST00000607316 C16orf45Q96MC5 204 aaPredicted RBP13.33□□□□□ -0.28
TMEM259-212ENST00000607316 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.33□□□□□ -0.28
TMEM259-212ENST00000607316 TRIM31Q9BZY9 425 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 STRADBQ9C0K7 418 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 OR52A5Q9H2C5 316 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 MRM3Q9HC36 420 aaKnown RBP13.33□□□□□ -0.28
TMEM259-212ENST00000607316 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
TMEM259-212ENST00000607316 PIKFYVEQ9Y2I7 2098 aa13.33□□□□□ -0.28
TMEM259-212ENST00000607316 DSPP15924 2871 aaKnown RBP13.33□□□□□ -0.28
TMEM259-212ENST00000607316 ANKRD11Q6UB99 2663 aaPredicted RBP13.32□□□□□ -0.28
TMEM259-212ENST00000607316 AP3B1O00203 1094 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 KRT37O76014 449 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 UBXN7O94888 489 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 MLNP12872 115 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 PAFAH1B1P43034 410 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 LEPRP48357 1165 aaKnown RBP13.32□□□□□ -0.28
TMEM259-212ENST00000607316 MAPK10P53779 464 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 EPHA4P54764 986 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 SQSTM1Q13501 440 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 BOP1Q14137 746 aaKnown RBP13.32□□□□□ -0.28
TMEM259-212ENST00000607316 CAPRIN2Q6IMN6 1127 aaKnown RBP13.32□□□□□ -0.28
TMEM259-212ENST00000607316 TMEM71Q6P5X7 295 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 UNC5BQ8IZJ1 945 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 ELMO1Q92556 727 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 GRAMD1AQ96CP6 724 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 SGSM3Q96HU1 749 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 SIGLEC10Q96LC7 697 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 SLC46A1Q96NT5 459 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 XAB2Q9HCS7 855 aaKnown RBP13.32□□□□□ -0.28
TMEM259-212ENST00000607316 ACSL5Q9ULC5 683 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 PCDHGA8Q9Y5G5 932 aa13.32□□□□□ -0.28
TMEM259-212ENST00000607316 ZCWPW2A0A1B0GU75 182 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 C17orf113A0A1B0GUU1 675 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 SDR42E2A6NKP2 422 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 CDRT15L2A8MXV6 281 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 KIF1CO43896 1103 aaKnown RBP13.31□□□□□ -0.28
TMEM259-212ENST00000607316 DXOO77932 396 aaKnown RBP13.31□□□□□ -0.28
TMEM259-212ENST00000607316 JMJD7P0C870 316 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 CCR7P32248 378 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 CAPZBP47756 277 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 DHX9Q08211 1270 aaKnown RBP13.31□□□□□ -0.28
TMEM259-212ENST00000607316 DHX34Q14147 1143 aaKnown RBP13.31□□□□□ -0.28
TMEM259-212ENST00000607316 ANKRD20A4Q4UJ75 823 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 ZNF789Q5FWF6 425 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 CTSL3PQ5NE16 218 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 HP1BP3Q5SSJ5 553 aaPredicted RBP13.31□□□□□ -0.28
TMEM259-212ENST00000607316 LYPLAL1Q5VWZ2 237 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 KIAA0930Q6ICG6 404 aaPredicted RBP13.31□□□□□ -0.28
TMEM259-212ENST00000607316 CERS6Q6ZMG9 384 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 VRK3Q8IV63 474 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 AVL9Q8NBF6 648 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 PHC3Q8NDX5 983 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 RNF31Q96EP0 1072 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 CRELD1Q96HD1 420 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 TGM7Q96PF1 710 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 WDR83Q9BRX9 315 aaKnown RBP13.31□□□□□ -0.28
TMEM259-212ENST00000607316 P2RY12Q9H244 342 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 UCK1Q9HA47 277 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 OCIAD1Q9NX40 245 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 SAMD15Q9P1V8 674 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 ANAPC5Q9UJX4 755 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 MAD1L1Q9Y6D9 718 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 RPS6KL1Q9Y6S9 549 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 MN1Q10571 1320 aaPredicted RBP13.31□□□□□ -0.28
TMEM259-212ENST00000607316 PKD1L2Q7Z442 2459 aa13.31□□□□□ -0.28
TMEM259-212ENST00000607316 FAM237BA0A1B0GVD1 139 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 UBA6A0AVT1 1052 aaPredicted RBP13.3□□□□□ -0.28
TMEM259-212ENST00000607316 CCDC188H7C350 402 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 TP73O15350 636 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 CAPN5O15484 640 aaPredicted RBP13.3□□□□□ -0.28
TMEM259-212ENST00000607316 ZW10O43264 779 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 PRAMEF10O60809 474 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 FTH1P02794 183 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 OR56A5P0C7T3 313 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 FGF3P11487 239 aaPredicted RBP13.3□□□□□ -0.28
TMEM259-212ENST00000607316 AMD1P17707 334 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 ITPKBP27987 946 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 RBMS1P29558 406 aaKnown RBP13.3□□□□□ -0.28
TMEM259-212ENST00000607316 EIF2S3P41091 472 aaKnown RBP13.3□□□□□ -0.28
TMEM259-212ENST00000607316 ITGA8P53708 1063 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 EIF3BP55884 814 aaKnown RBP13.3□□□□□ -0.28
TMEM259-212ENST00000607316 EIF3IQ13347 325 aaKnown RBP13.3□□□□□ -0.28
TMEM259-212ENST00000607316 PLCL1Q15111 1095 aa13.3□□□□□ -0.28
TMEM259-212ENST00000607316 CLPPQ16740 277 aaPredicted RBP13.3□□□□□ -0.28
TMEM259-212ENST00000607316 TYSND1Q2T9J0 566 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms