RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 DTX4Q9Y2E6 619 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 FNDC3AQ9Y2H6 1198 aaKnown RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SCN4AP35499 1836 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 RGPD5Q99666 1765 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM237BA0A1B0GVD1 139 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SHISA8B8ZZ34 492 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 H0YGN5 161 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM229AH3BQW9 127 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF821O75541 412 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 BMP10O95393 424 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PSMG1O95456 288 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ITGA5P08648 1049 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 NFICP08651 508 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 KRT15P19012 456 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 MARK3P27448 753 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CTNNB1P35222 781 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PSMB10P40306 273 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CHN2P52757 468 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ATP12AP54707 1039 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 C21orf59P57076 290 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PHC1P78364 1004 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CD300CQ08708 224 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF844Q08AG5 666 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 MED21Q13503 144 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 DUSP7Q16829 419 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 HYAL4Q2M3T9 481 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 NADK2Q4G0N4 442 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PAGE2BQ5JRK9 111 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF484Q5JVG2 852 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PXDC1Q5TGL8 231 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 JADE1Q6IE81 842 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PSRC1Q6PGN9 363 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 BBS12Q6ZW61 710 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 USP30Q70CQ3 517 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ARID3BQ8IVW6 561 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM109AQ8N4B1 249 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 MCPH1Q8NEM0 835 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 TBC1D16Q8TBP0 767 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 TAMM41Q96BW9 452 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PAFAH2Q99487 392 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 TMEM168Q9H0V1 697 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC6A15Q9H2J7 730 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 VCX2Q9H322 139 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 TP63Q9H3D4 680 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CUEDC2Q9H467 287 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 LRRC19Q9H756 370 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 C17orf75Q9HAS0 396 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SMURF1Q9HCE7 757 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ZDHHC18Q9NUE0 388 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CGGBP1Q9UFW8 167 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 MKLN1Q9UL63 735 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 NFU1Q9UMS0 254 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 DIMT1Q9UNQ2 313 aaKnown RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PPIL1Q9Y3C6 166 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 KLF2Q9Y5W3 355 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 NFS1Q9Y697 457 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 KCNE2Q9Y6J6 123 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 MYH6P13533 1939 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ASTN2O75129 1339 aaPredicted RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 A0A075B6Q4 140 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 EDDM13A0A1B0GTR0 161 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 PRAMEF27A3QJZ7 478 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 OR14I1A6ND48 311 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ANKRD61A6NGH8 418 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 OR6C75A6NL08 312 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ARVCFO00192 962 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 DLL1O00548 723 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 LANCL1O43813 399 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ENTPD5O75356 428 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 RHBDL1O75783 438 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 HAUS5O94927 633 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SHBGP04278 402 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ATP1A1P05023 1023 aaKnown RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TFAP2AP05549 437 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 PRPS2P11908 318 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 CDH2P19022 906 aaPredicted RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 EPHA1P21709 976 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 CD6P30203 668 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 RRM2P31350 389 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 RYKP34925 604 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 GRK5P34947 590 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 GMPRP36959 345 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 CDK9P50750 372 aaKnown RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 AIF1P55008 147 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 PRMT2P55345 433 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 RAB14P61106 215 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 FOLH1Q04609 750 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SRSF11Q05519 484 aaKnown RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 LGALS3BPQ08380 585 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SCAPQ12770 1279 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 MAPK6Q16659 721 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 CERKLQ49MI3 558 aaPredicted RBP4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC35F1Q5T1Q4 408 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 SAMD5Q5TGI4 173 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 PLEKHA7Q6IQ23 1121 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 TAS1R1Q7RTX1 841 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF410Q86VK4 478 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 FITM2Q8N6M3 262 aa4.95□□□□□ -1.62
SPTBN1-206ENST00000602898 POMGNT2Q8NAT1 580 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms